Evidence map›Paper›PMID 30542078›Full record

ArticleThe ISME journal2019

Reduced TCA cycle rates at high hydrostatic pressure hinder hydrocarbon degradation and obligate oil degraders in natural, deep-sea microbial communities.

Alberto Scoma, Robert Heyer, Ridwan Rifai, Christian Dandyk, Ian Marshall, Frederiek-Maarten Kerckhof, Angeliki Marietou, Henricus T S Boshker, Filip J R Meysman, Kirsten G Malmos and 5 more

Open access · bronzeAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in The ISME journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 27 citations in OpenAlex.

  1. High hydrostatic pressure stimulates n-CCommunications biology · 2025
    Article
  2. Article
  3. Article
  4. The phylogeny and metabolic potentials of anFrontiers in microbiology · 2023
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 5 countries.

Alberto ScomaCenter for Microbial Ecology and Technology (CMET), Gent University, Coupure Links 653, Gent, B 9000, Belgium. as@eng.au.dk.ORCID http://orcid.org/0000-0001-7981-0847
Robert HeyerOtto von Guericke University of Magdeburg, Bioprocess Engineering, Universitätsplatz 2 G25, Magdeburg, 39106, Germany.
Ridwan RifaiCenter for Microbial Ecology and Technology (CMET), Gent University, Coupure Links 653, Gent, B 9000, Belgium.
Christian DandykOtto von Guericke University of Magdeburg, Bioprocess Engineering, Universitätsplatz 2 G25, Magdeburg, 39106, Germany.
Ian MarshallDepartment of Bioscience, Microbiology Section, Aarhus University, Ny Munkegade 116, Aarhus C, 8000, Denmark.
Frederiek-Maarten KerckhofCenter for Microbial Ecology and Technology (CMET), Gent University, Coupure Links 653, Gent, B 9000, Belgium.ORCID http://orcid.org/0000-0002-4472-6810
Angeliki MarietouDepartment of Bioscience, Microbiology Section, Aarhus University, Ny Munkegade 116, Aarhus C, 8000, Denmark.ORCID http://orcid.org/0000-0003-4756-0067
Henricus T S BoshkerDepartment of Biotechnology, Delft University of Technology, Van der Maasweg 9, Delft, 2629HZ, The Netherlands.
Filip J R MeysmanDepartment of Biotechnology, Delft University of Technology, Van der Maasweg 9, Delft, 2629HZ, The Netherlands.
Kirsten G MalmosiNANO, Department of Chemistry, Aarhus University, Gustav Wieds vej 14, Aarhus C, 8000, Denmark.
Thomas VosegaardiNANO, Department of Chemistry, Aarhus University, Gustav Wieds vej 14, Aarhus C, 8000, Denmark.ORCID http://orcid.org/0000-0001-5414-4550
Pieter VermeirLaboratory for Chemical Analyses (LCA), Department of Green Chemistry and Technology, Gent University, Valentin Vaerwyckweg 1, Ghent, 9000, Belgium.
Ibrahim M BanatSchool of Biomedical Sciences, University of Ulster, Coleraine, N. Ireland, UK.ORCID http://orcid.org/0000-0001-8964-2840
Dirk BenndorfOtto von Guericke University of Magdeburg, Bioprocess Engineering, Universitätsplatz 2 G25, Magdeburg, 39106, Germany.
Nico BoonCenter for Microbial Ecology and Technology (CMET), Gent University, Coupure Links 653, Gent, B 9000, Belgium.
Aarhus University · DKGhent University · BEOtto-von-Guericke-Universität Magdeburg · DEMax Planck Institute for Dynamics of Complex Technical Systems · DEUniversity College Ghent · BEUniversity of Antwerp · BEUniversity of Ulster · GBVrije Universiteit Brussel · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Petroleum hydrocarbons reach the deep-sea following natural and anthropogenic factors. The process by which they enter deep-sea microbial food webs and impact the biogeochemical cycling of carbon and other elements is unclear. Hydrostatic pressure (HP) is a distinctive parameter of the deep sea, although rarely investigated. Whether HP alone affects the assembly and activity of oil-degrading communities remains to be resolved. Here we have demonstrated that hydrocarbon degradation in deep-sea microbial communities is lower at native HP (10 MPa, about 1000 m below sea surface level) than at ambient pressure. In long-term enrichments, increased HP selectively inhibited obligate hydrocarbon-degraders and downregulated the expression of beta-oxidation-related proteins (i.e., the main hydrocarbon-degradation pathway) resulting in low cell growth and CO

Indexed as

Citric Acid CycleMicrobiotaBacteriaGeologic SedimentsHydrocarbonsHydrostatic PressurePetroleumSeawaterHydrocarbonsPetroleum

Identifiers

PMID30542078
PMCPMC6461773
OpenAlexW2903612800

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.