Evidence map›Paper›PMID 30541551›Full record

ArticleJournal of translational medicine2018

Posterior HOX genes and HOTAIR expression in the proximal and distal colon cancer pathogenesis.

Fabiana Tatangelo, Annabella Di Mauro, Giosuè Scognamiglio, Gabriella Aquino, Antonio Lettiero, Paolo Delrio, Antonio Avallone, Monica Cantile, Gerardo Botti

Open access · goldAbstract read
In one paragraph

Article in Journal of translational medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it, 51 citations in OpenAlex.

  1. A Systematic Review onInternational journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Fabiana TatangeloPathology Unit, Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy.
Annabella Di MauroPathology Unit, Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy.
Giosuè ScognamiglioPathology Unit, Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy.
Gabriella AquinoPathology Unit, Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy.
Antonio LettieroPathology Unit, Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy.
Paolo DelrioColorectal Cancer Surgery Unit, Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy.
Antonio AvalloneAbdominal Oncology Unit, Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy.
Monica CantilePathology Unit, Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy. m.cantile@istitutotumori.na.it.
Gerardo BottiScientific Direction, Istituto Nazionale Tumori Fondazione G. Pascale-IRCCS, Naples, Italy.
Istituto Nazionale Tumori IRCCS "Fondazione G. Pascale" · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIncreasing evidences showed that the location of the primary tumor on the right (proximal) or left (distal) side of the colon have a prognostic/predictive value for colon cancer patients. However, the understanding of the molecular mechanisms that contribute to the pathogenesis in different location of colon is still unclear. Probably an important role could be played by genes that control the spatial-temporal development of bodily structures, such as HOX genes.

methodsThe main purpose of this study was to analyze the expression of the paralogous 13 HOX genes and of the HOX regulating lncRNA HOTAIR in distal and proximal CRC cases. We have carried out a Tissue Micro Array with left and right CRC samples associated with all clinical-pathological parameters of patients. The expression of HOX genes was evaluated by immunohistochemistry and the staining of HOTAIR was performed by in situ hybridization using a specifically designed LNA probe.

resultsAll paralogous 13 HOX genes and HOTAIR are silent in normal tissue and expressed in CRC samples. HOXB13, HOXC13 and HOTAIR showed a statistical association with lymph nodes metastasis (p value = 0.003, p value = 0.05, p value = 0.04). HOXB13, HOXC13 and lncRNA HOTAIR are overexpressed in right CRCs samples (p value < 0 and p value = 0.021). HOTAIR is also strongly correlated with HOXB13 (p value = 0.02) and HOXC13 (p value = 0.042) expression.

conclusionsOur data highlighted an important role of posterior HOX genes in colorectal cancer carcinogenesis. Specifically, the aberrant expression of the HOXB13, HOXC13 and HOTAIR in proximal colon cancers could add an important dowel in understanding molecular mechanisms related to tumor pathogenesis in this location.

Indexed as

Gene Expression Regulation, NeoplasticGenes, HomeoboxAgedAged, 80 and overCarcinoembryonic AntigenColonic NeoplasmsFemaleHumansLymphatic MetastasisMaleMiddle AgedRNA, Long NoncodingCarcinoembryonic AntigenHOTAIR long untranslated RNA, humanRNA, Long NoncodingHOX genesPrognosisProximal and distal CRC pathogenesis

Identifiers

PMID30541551
PMCPMC6292169
OpenAlexW2903666566

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.