Evidence map›Paper›PMID 30541439›Full record

ArticleBMC microbiology2018

Long-term colonization exceeding six years from early infancy of Bifidobacterium longum subsp. longum in human gut.

Kaihei Oki, Takuya Akiyama, Kazunori Matsuda, Agata Gawad, Hiroshi Makino, Eiji Ishikawa, Kenji Oishi, Akira Kushiro, Junji Fujimoto

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

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  16. LowFrontiers in microbiology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Kaihei OkiYakult Honsha European Research Center for Microbiology ESV, Technologiepark 4, Gent-Zwijnaarde, Belgium. kaihei.oki@yher.be.ORCID 0000-0002-3189-708X
Takuya AkiyamaYakult Honsha European Research Center for Microbiology ESV, Technologiepark 4, Gent-Zwijnaarde, Belgium.
Kazunori MatsudaYakult Honsha European Research Center for Microbiology ESV, Technologiepark 4, Gent-Zwijnaarde, Belgium.
Agata GawadYakult Honsha European Research Center for Microbiology ESV, Technologiepark 4, Gent-Zwijnaarde, Belgium.
Hiroshi MakinoYakult Honsha European Research Center for Microbiology ESV, Technologiepark 4, Gent-Zwijnaarde, Belgium.
Eiji IshikawaYakult Honsha European Research Center for Microbiology ESV, Technologiepark 4, Gent-Zwijnaarde, Belgium.
Kenji OishiYakult Honsha European Research Center for Microbiology ESV, Technologiepark 4, Gent-Zwijnaarde, Belgium.
Akira KushiroYakult Central Institute, 5-11 Izumi, Kunitachi, Tokyo, 186-8650, Japan.
Junji FujimotoYakult Honsha European Research Center for Microbiology ESV, Technologiepark 4, Gent-Zwijnaarde, Belgium.
Yakult Central Institute · JPYakult Honsha (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe importance of the gut microbiota at the early stage of life and their longitudinal effect on host health have recently been well investigated. In particular, Bifidobacterium longum subsp. longum, a common component of infant gut microbiota, appears in the gut shortly after birth and can be detected there throughout an individual's lifespan. However, it remains unclear whether this species colonizes in the gut over the long term from early infancy. Here, we investigated the long-term colonization of B. longum subsp. longum by comparing the genotypes of isolates obtained at different time points from individual subjects. Strains were isolated over time from the feces of 12 subjects followed from early infancy (the first six months of life) up to childhood (approximately six years of age). We also considered whether the strains were transmitted from their mothers' perinatal samples (prenatal feces and postnatal breast milk).

resultsIntra-species diversity of B. longum subsp. longum was observed in some subjects' fecal samples collected in early infancy and childhood, as well as in the prenatal fecal samples of their mothers. Among the highlighted strains, several were confirmed to colonize and persist in single individuals from as early as 90 days of age for more than six years; these were classified as long-term colonizers. One of the long-term colonizers was also detected from the corresponding mother's postnatal breast milk. Quantitative polymerase chain reaction data suggested that these long-term colonizers persisted in the subjects' gut despite the existence of the other predominant species of Bifidobacterium.

conclusionsOur results showed that several strains belonging to B. longum subsp. longum colonized in the human gut from early infancy through more than six years, confirming the existence of long-term colonizers from this period. Moreover, the results suggested that these strains persisted in the subjects' gut while co-existing with the other predominant bifidobacterial species. Our findings also suggested the importance of microbial-strain colonization in early infancy relative to their succession and showed the possibility that probiotics targeting infants might have longitudinal effects.

trial registrationTRN: ISRCTN25216339 . Date of registration: 11/03/2016. Prospectively registered.

Indexed as

Gastrointestinal MicrobiomeAdultBifidobacterium longumChildChild, PreschoolFecesFemaleHumansInfantIntestinesMaleMilk, HumanMothersPhylogenyBacterial colonizationBifidobacterium longum subsp. longumChildCulturingHuman gut microbiotaInfantLong-term colonizationMultilocus sequence typing (MLST)Perinatal motherQuantitative PCR

Identifiers

PMID30541439
PMCPMC6292050
OpenAlexW2905300057

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.