Evidence map›Paper›PMID 30540769›Full record

ArticlePloS one2018

Coordinated regulation of transcription by CcpA and the Staphylococcus aureus two-component system HptRS.

Joseph M Reed, Sean Olson, Danielle F Brees, Caitlin E Griffin, Ryan A Grove, Paul J Davis, Stephen D Kachman, Jiri Adamec, Greg A Somerville

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Joseph M ReedSchool of Veterinary Medicine and Biomedical Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America.
Sean OlsonDepartment of Statistics, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America.
Danielle F BreesSchool of Veterinary Medicine and Biomedical Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America.
Caitlin E GriffinSchool of Veterinary Medicine and Biomedical Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America.
Ryan A GroveDepartment of Biochemistry, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America.
Paul J DavisUnaffiliated, Honey Creek, Iowa, United States of America.
Stephen D KachmanDepartment of Statistics, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America.ORCID 0000-0003-0506-513X
Jiri AdamecDepartment of Biochemistry, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America.
Greg A SomervilleSchool of Veterinary Medicine and Biomedical Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America.ORCID 0000-0002-0991-8737
University of Nebraska–Lincoln · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The success of Staphylococcus aureus as a pathogen is due in part to its ability to adapt to changing environmental conditions using signal transduction pathways, such as metabolite- responsive regulators and two-component systems. S. aureus has a two-component system encoded by the gene pair sav0224 (hptS) and sav0223 (hptR) that regulate the hexose phosphate transport (uhpT) system in response to extracellular glucose-6-phosphate. Glycolytic intermediates such as glucose-6-phosphate are important carbon sources that also modulate the activity of the global metabolite-responsive transcriptional regulator CcpA. Because uhpT has a putative CcpA binding site in its promoter and it is regulated by HptR, it was hypothesized the regulons of CcpA and HptR might intersect. To determine if the regulatory domains of CcpA and HptRS overlap, ccpA was deleted in strains SA564 and SA564-ΔhptRS and growth, metabolic, proteomic, and transcriptional differences were assessed. As expected, CcpA represses hptS and hptR in a glucose dependent manner; however, upon CcpA derepression, the HptRS system functions as a transcriptional activator of metabolic genes within the CcpA regulon. Importantly, inactivation of ccpA and hptRS altered sensitivity to fosfomycin and ampicillin in the absence of exogenous glucose-6-phosphate, indicating that both CcpA and HptRS modulate antibiotic susceptibility.

Indexed as

AmmoniaAnti-Bacterial AgentsBacterial ProteinsBinding SitesChromatography, High Pressure LiquidFosfomycinGlucoseMonosaccharide Transport ProteinsMutagenesisPromoter Regions, GeneticProteomeProteomicsSpectrometry, Mass, Electrospray IonizationStaphylococcus aureusTranscription, GeneticAmmoniaAnti-Bacterial AgentsBacterial ProteinsFosfomycinGlucoseMonosaccharide Transport ProteinsProteome

Identifiers

PMID30540769
PMCPMC6291074
OpenAlexW2904713072

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.