Evidence map›Paper›PMID 30538685›Full record

ArticleFrontiers in microbiology2018

Quantifying Inorganic Nitrogen Assimilation by

Marco Giardina, Soshan Cheong, Christopher E Marjo, Peta L Clode, Paul Guagliardo, Russell Pickford, Mathieu Pernice, Justin R Seymour, Jean-Baptiste Raina

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Marco GiardinaClimate Change Cluster, University of Technology Sydney, Sydney, NSW, Australia.
Soshan CheongMark Wainwright Analytical Centre, University of New South Wales, Kensington, NSW, Australia.
Christopher E MarjoMark Wainwright Analytical Centre, University of New South Wales, Kensington, NSW, Australia.
Peta L ClodeCentre for Microscopy Characterisation and Analysis, The University of Western Australia, Perth, WA, Australia.
Paul GuagliardoCentre for Microscopy Characterisation and Analysis, The University of Western Australia, Perth, WA, Australia.
Russell PickfordBioanalytical Mass Spectrometry Facility, University of New South Wales, Sydney, NSW, Australia.
Mathieu PerniceClimate Change Cluster, University of Technology Sydney, Sydney, NSW, Australia.
Justin R SeymourClimate Change Cluster, University of Technology Sydney, Sydney, NSW, Australia.
Jean-Baptiste RainaClimate Change Cluster, University of Technology Sydney, Sydney, NSW, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microorganisms drive most of the major biogeochemical cycles in the ocean, but the rates at which individual species assimilate and transform key elements is generally poorly quantified. One of these important elements is nitrogen, with its availability limiting primary production across a large proportion of the ocean. Nitrogen uptake by marine microbes is typically quantified using bulk-scale approaches, such as Elemental Analyzer-Isotope Ratio Mass Spectrometry (EA-IRMS), which averages uptake over entire communities, masking microbial heterogeneity. However, more recent techniques, such as secondary ion mass spectrometry (SIMS), allow for elucidation of assimilation rates at the scale at which they occur: the single-cell level. Here, we combine and compare the application of bulk (EA-IRMS) and single-cell approaches (NanoSIMS and Time-of-Flight-SIMS) for quantifying the assimilation of inorganic nitrogen by the ubiquitous marine primary producer

Indexed as

EA-IRMSmetabolic heterogeneityNanoSIMSnitrogensingle cellSynechococcusToF-SIMS

Identifiers

PMID30538685
PMCPMC6277480

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.