Evidence map›Paper›PMID 30538680›Full record

ArticleFrontiers in microbiology2018

A New Phylogenetic Framework for the Animal-Adapted

Daniela Brites, Chloé Loiseau, Fabrizio Menardo, Sonia Borrell, Maria Beatrice Boniotti, Robin Warren, Anzaan Dippenaar, Sven David Charles Parsons, Christian Beisel, Marcel A Behr and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed
14.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 200 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Congenital Tuberculosis in a Stillborn Calf.Pathogens (Basel, Switzerland) · 2026
    Article
  9. Article
  10. Review
  11. Virulence hierarchies within theProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  12. TheeLife · 2025
    Article
  13. Performance of direct detection ofMicrobiology spectrum · 2025
    Article
  14. Review
  15. UShER-TB: Scalable, Comprehensive, Accessible Phylogenomic Analysis ofmedRxiv : the preprint server for health sciences · 2025
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 9 institutions in 6 countries.

Daniela BritesSwiss Tropical and Public Health Institute, Basel, Switzerland.
Chloé LoiseauSwiss Tropical and Public Health Institute, Basel, Switzerland.
Fabrizio MenardoSwiss Tropical and Public Health Institute, Basel, Switzerland.
Sonia BorrellSwiss Tropical and Public Health Institute, Basel, Switzerland.
Maria Beatrice BoniottiIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia-Romagna: Centro Nazionale di Referenza per la Tubercolosi Bovina, Brescia, Italy.
Robin WarrenSAMRC Centre for TB Research, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Stellenbosch, South Africa.
Anzaan DippenaarSAMRC Centre for TB Research, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Stellenbosch, South Africa.
Sven David Charles ParsonsSAMRC Centre for TB Research, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Stellenbosch, South Africa.
Christian BeiselDepartment of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.
Marcel A BehrMcGill International TB Centre, Infectious Diseases and Immunity in Global Health, McGill University Health Centre and Research Institute, Montréal, QC, Canada.
Janet A FyfeMycobacterium Reference Laboratory, Victoria Infectious Diseases Reference Laboratory, Peter Doherty Institute, Melbourne, VIC, Australia.
Mireia CoscollaInstitute for Integrative Systems Biology (I2SysBio), University of Valencia-CSIC, Valencia, Spain.
Sebastien GagneuxSwiss Tropical and Public Health Institute, Basel, Switzerland.
Swiss Tropical and Public Health Institute · CHSouth African Medical Research Council · ZAUniversity of Basel · CHETH Zurich · CHIstituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna "Bruno Ubertini" · ITMcGill University Health Centre · CAPeter Doherty Institute · AUStellenbosch University · ZAUniversitat de València · ES

Funding

European Research Council 309540
6 · The paper itself

Abstract

Tuberculosis (TB) affects humans and other animals and is caused by bacteria from the

Indexed as

genetic diversityhost–pathogen interactionshost rangespecificitywhole-genome sequencing

Identifiers

PMID30538680
PMCPMC6277475
OpenAlexW2886063355

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.