Evidence map›Paper›PMID 30538212›Full record

ArticleAging2018

Integrated multi-omics characterization reveals a distinctive metabolic signature and the role of NDUFA4L2 in promoting angiogenesis, chemoresistance, and mitochondrial dysfunction in clear cell renal cell carcinoma.

Giuseppe Lucarelli, Monica Rutigliano, Fabio Sallustio, Domenico Ribatti, Andrea Giglio, Martina Lepore Signorile, Valentina Grossi, Paola Sanese, Anna Napoli, Eugenio Maiorano and 9 more

Open access · greenAbstract read
In one paragraph

Article in Aging, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 173 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
173citing papers in PubMed, 6 pooled it
5.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

173 citing papers in PubMed, 6 syntheses or guidelines pooled it, 245 citations in OpenAlex.

  1. Pooled it
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  13. A multi-omics prognostic model and functional validation ofTranslational andrology and urology · 2026
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113 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 2 countries.

Giuseppe Lucarelli *Department of Emergency and Organ Transplantation- Urology, Andrology and Kidney Transplantation Unit, University of Bari, Bari, Italy.
Monica Rutigliano *Department of Emergency and Organ Transplantation- Urology, Andrology and Kidney Transplantation Unit, University of Bari, Bari, Italy.
Fabio SallustioDepartment of Basic Medical Sciences, Neuroscience and Sense Organs, University of Bari, Bari, Italy.
Domenico RibattiDepartment of Basic Medical Sciences, Neuroscience and Sense Organs, University of Bari, Bari, Italy.
Andrea GiglioDepartment of Emergency and Organ Transplantation- Urology, Andrology and Kidney Transplantation Unit, University of Bari, Bari, Italy.
Martina Lepore SignorileDepartment of Biomedical Sciences and Human Oncology, Medical Genetics, University of Bari, Bari, Italy.
Valentina GrossiDepartment of Biomedical Sciences and Human Oncology, Medical Genetics, University of Bari, Bari, Italy.
Paola SaneseDepartment of Biomedical Sciences and Human Oncology, Medical Genetics, University of Bari, Bari, Italy.
Anna NapoliDepartment of Emergency and Organ Transplantation, Pathology Unit, University of Bari, Bari, Italy.
Eugenio MaioranoDepartment of Emergency and Organ Transplantation, Pathology Unit, University of Bari, Bari, Italy.
Cristina BianchiDepartment of Health Sciences, School of Medicine and Surgery, University of Milano Bicocca, Milan, Italy.
Roberto A PeregoDepartment of Health Sciences, School of Medicine and Surgery, University of Milano Bicocca, Milan, Italy.
Matteo FerroDivision of Urology, European Institute of Oncology, Milan, Italy.
Elena RanieriDepartment of Medical and Surgical Sciences, Molecular Medicine Center, Section of Clinical Pathology, University of Foggia, Foggia, Italy.
Grazia SerinoNational Institute of Gastroenterology, 'S de Bellis', Castellana Grotte, Bari, Italy.
Lauren N BellMetabolon, Inc., Research Triangle Park, Morrisville, NC 27560, USA.
Pasquale DitonnoDepartment of Emergency and Organ Transplantation- Urology, Andrology and Kidney Transplantation Unit, University of Bari, Bari, Italy.
Cristiano SimoneDepartment of Biomedical Sciences and Human Oncology, Medical Genetics, University of Bari, Bari, Italy.
Michele BattagliaDepartment of Emergency and Organ Transplantation- Urology, Andrology and Kidney Transplantation Unit, University of Bari, Bari, Italy.
University of Bari Aldo Moro · ITGastroenterology Hospital "Saverio de Bellis" · ITUniversity of Milano-Bicocca · ITEuropean Institute of Oncology · ITMetabolon (United States) · USUniversity of Foggia · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An altered metabolism is involved in the development of clear cell - renal cell carcinoma (ccRCC), and in this tumor many altered genes play a fundamental role in controlling cell metabolic activities. We delineated a large-scale metabolomic profile of human ccRCC, and integrated it with transcriptomic data to connect the variations in cancer metabolism with gene expression changes. Moreover, to better analyze the specific contribution of metabolic gene alterations potentially associated with tumorigenesis and tumor progression, we evaluated the transcription profile of primary renal tumor cells. Untargeted metabolomic analysis revealed a signature of an increased glucose uptake and utilization in ccRCC. In addition, metabolites related to pentose phosphate pathway were also altered in the tumor samples in association with changes in Krebs cycle intermediates and related metabolites. We identified NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 4-like 2 (NDUFA4L2) as the most highly expressed gene in renal cancer cells and evaluated its role in sustaining angiogenesis, chemoresistance, and mitochondrial dysfunction. Finally, we showed that silencing of NDUFA4L2 affects cell viability, increases mitochondrial mass, and induces ROS generation in hypoxia.

Indexed as

AnimalsCarcinoma, Renal CellCell Line, TumorCell ProliferationCell SurvivalChick EmbryoChorioallantoic MembraneComputational BiologyData MiningDNA, MitochondrialDrug Resistance, NeoplasmElectron Transport Complex IGlucoseHumansKidney NeoplasmsMetabolomicsDNA, MitochondrialElectron Transport Complex IGlucoseNDUFA4L2 protein, humanReactive Oxygen SpeciesmetabolomicsmitochondriaNDUFA4L2renal cell carcinomatranscriptome

Identifiers

PMID30538212
PMCPMC6326659
OpenAlexW2904346214

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.