Evidence map›Paper›PMID 30538195›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

RNA-mediated gene fusion in mammalian cells.

Sachin Kumar Gupta, Liming Luo, Laising Yen

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. ALK Knock-In Reporter Reveals APE1 as a Negative Regulator ofInternational journal of molecular sciences · 2026
    Article
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  9. Non-Canonical Splicing and Its Implications in Brain Physiology and Cancer.International journal of molecular sciences · 2022
    Review
  10. Article
  11. Article
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  13. Article
  14. Review
  15. Review
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  17. RNA: a double-edged sword in genome maintenance.Nature reviews. Genetics · 2020
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Sachin Kumar GuptaDepartment of Pathology & Immunology, Baylor College of Medicine, Houston, TX 77030.
Liming LuoDepartment of Pathology & Immunology, Baylor College of Medicine, Houston, TX 77030.
Laising YenDepartment of Pathology & Immunology, Baylor College of Medicine, Houston, TX 77030; yen@bcm.edu.
Children's Cancer Center · USBaylor College of Medicine · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI Geoffrey A Preidis · 2001 to 2026
$28.3M
Harnessing the power of RNA sensor for imaging molecular signatures in vivoR01EB013584 · NIBIB · BAYLOR COLLEGE OF MEDICINE · PI YEN, LAISING LEWIS · 2011 to 2014
$1.4M
NCI NIH HHS P30 CA125123NIBIB NIH HHS R01 EB013584NIDDK NIH HHS P30 DK056338
6 · The paper itself

Abstract

One of the hallmarks of cancer is the formation of oncogenic fusion genes as a result of chromosomal translocations. Fusion genes are presumed to form before fusion RNA expression. However, studies have reported the presence of fusion RNAs in individuals who were negative for chromosomal translocations. These observations give rise to "the cart before the horse" hypothesis, in which the genesis of a fusion RNA precedes the fusion gene. The fusion RNA then guides the genomic rearrangements that ultimately result in a gene fusion. However, RNA-mediated genomic rearrangements in mammalian cells have never been demonstrated. Here we provide evidence that expression of a chimeric RNA drives formation of a specified gene fusion via genomic rearrangement in mammalian cells. The process is: (

Indexed as

Gene FusionCell Cycle ProteinsCell LineCytoskeletal ProteinsHumansMicrotubule ProteinsRNASerine EndopeptidasesTranscriptional Regulator ERGCell Cycle ProteinsCEP131 protein, humanCytoskeletal ProteinsMicrotubule ProteinsRNASerine EndopeptidasesTMPRSS2 protein, humanTranscriptional Regulator ERGchimeric RNAgene fusionnoncoding RNAprostate cancerR-loop

Identifiers

PMID30538195
PMCPMC6310785
OpenAlexW2903988079

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.