Evidence map›Paper›PMID 30538121›Full record

ArticleCancer research2019

TET2-Dependent Hydroxymethylome Plasticity Reduces Melanoma Initiation and Progression.

Elise Bonvin, Enrico Radaelli, Martin Bizet, Flavie Luciani, Emilie Calonne, Pascale Putmans, David Nittner, Nitesh Kumar Singh, Sara Francesca Santagostino, Valérie Petit and 3 more

Open access · greenAbstract read
In one paragraph

Article in Cancer research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

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  15. TETology: Epigenetic Mastermind in Action.Applied biochemistry and biotechnology · 2021
    Review
  16. Article
  17. Classification and Grading of Melanocytic Lesions in a Mouse Model ofThe journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Elise BonvinLaboratory of Cancer Epigenetics, Faculty of Medicine, ULB-Cancer Research Center (U-CRC), Université Libre de Bruxelles (ULB), Brussels, Belgium.
Enrico RadaelliMouse Histopathology Core Facility, VIB Center for Brain & Disease Research, Leuven, Belgium.ORCID 0000-0002-2885-0221
Martin BizetLaboratory of Cancer Epigenetics, Faculty of Medicine, ULB-Cancer Research Center (U-CRC), Université Libre de Bruxelles (ULB), Brussels, Belgium.
Flavie LucianiLaboratory for Molecular Cancer Biology, VIB Center for Cancer Biology, Leuven, Belgium.
Emilie CalonneLaboratory of Cancer Epigenetics, Faculty of Medicine, ULB-Cancer Research Center (U-CRC), Université Libre de Bruxelles (ULB), Brussels, Belgium.
Pascale PutmansLaboratory of Cancer Epigenetics, Faculty of Medicine, ULB-Cancer Research Center (U-CRC), Université Libre de Bruxelles (ULB), Brussels, Belgium.
David NittnerLaboratory for Molecular Cancer Biology, VIB Center for Cancer Biology, Leuven, Belgium.ORCID 0000-0002-2939-2453
Nitesh Kumar SinghLaboratory of Cancer Epigenetics, Faculty of Medicine, ULB-Cancer Research Center (U-CRC), Université Libre de Bruxelles (ULB), Brussels, Belgium.
Sara Francesca SantagostinoLaboratory of Comparative Pathology, Memorial Sloan Kettering Cancer Center, The Rockefeller University, Weill Cornell Medicine, New York, New York.
Valérie PetitNormal and Pathological Development of Melanocytes, CNRS UMR3347, INSERM U1021, Institut Curie, Orsay, France.
Lionel LarueNormal and Pathological Development of Melanocytes, CNRS UMR3347, INSERM U1021, Institut Curie, Orsay, France.
Jean Christophe MarineLaboratory for Molecular Cancer Biology, VIB Center for Cancer Biology, Leuven, Belgium. ffuks@ulb.ac.be JeanChristophe.Marine@kuleuven.vib.be.
François FuksLaboratory of Cancer Epigenetics, Faculty of Medicine, ULB-Cancer Research Center (U-CRC), Université Libre de Bruxelles (ULB), Brussels, Belgium. ffuks@ulb.ac.be JeanChristophe.Marine@kuleuven.vib.be.
Université Libre de Bruxelles · BEVIB-KU Leuven Center for Cancer Biology · BECentre National de la Recherche Scientifique · FRMemorial Sloan Kettering Cancer Center · USVIB-KU Leuven Center for Brain & Disease Research · BE

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

Although numerous epigenetic aberrancies accumulate in melanoma, their contribution to initiation and progression remain unclear. The epigenetic mark 5-hydroxymethylcytosine (5hmC), generated through TET-mediated DNA modification, is now referred to as the sixth base of DNA and has recently been reported as a potential biomarker for multiple types of cancer. Loss of 5hmC is an epigenetic hallmark of melanoma, but whether a decrease in 5hmc levels contributes directly to pathogenesis or whether it merely results from disease progression-associated epigenetic remodeling remains to be established. Here, we show that NRAS-driven melanomagenesis in mice is accompanied by an overall decrease in 5hmC and specific 5hmC gains in selected gene bodies. Strikingly, genetic ablation of

Indexed as

5-MethylcytosineAnimalsDioxygenasesDisease ProgressionDNA-Binding ProteinsDNA, NeoplasmEpigenesis, GeneticGene Expression Regulation, NeoplasticHumansMelanoma, ExperimentalMiceMice, Inbred C57BLMice, Inbred DBAMice, KnockoutMice, TransgenicMonomeric GTP-Binding Proteins5-hydroxymethylcytosine5-MethylcytosineDioxygenasesDNA-Binding ProteinsDNA, NeoplasmMonomeric GTP-Binding ProteinsNras protein, mouseProto-Oncogene ProteinsTet2 protein, mouse

Identifiers

PMID30538121
PMCPMC6612266
OpenAlexW2903860270

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.