Evidence map›Paper›PMID 30538120›Full record

ArticleCancer research2019

Differential Subcellular Localization Regulates Oncogenic Signaling by ROS1 Kinase Fusion Proteins.

Dana S Neel, David V Allegakoen, Victor Olivas, Manasi K Mayekar, Golzar Hemmati, Nilanjana Chatterjee, Collin M Blakely, Caroline E McCoach, Julia K Rotow, Anh Le and 6 more

Open access · greenAbstract read
In one paragraph

Article in Cancer research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 96 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Frontiers in oncology · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
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  14. Article
  15. Article
  16. Article
  17. Transcriptomic analysis ofFrontiers in oncology · 2024
    Article
  18. Article
  19. Article
  20. Analysis of CD74 Occurrence in Oncogenic Fusion Proteins.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 2 countries.

Dana S NeelDepartment of Medicine, University of California at San Francisco, San Francisco, California.
David V AllegakoenDepartment of Medicine, University of California at San Francisco, San Francisco, California.ORCID 0000-0002-0261-2962
Victor OlivasDepartment of Medicine, University of California at San Francisco, San Francisco, California.
Manasi K MayekarDepartment of Medicine, University of California at San Francisco, San Francisco, California.
Golzar HemmatiDepartment of Medicine, University of California at San Francisco, San Francisco, California.
Nilanjana ChatterjeeDepartment of Medicine, University of California at San Francisco, San Francisco, California.
Collin M BlakelyDepartment of Medicine, University of California at San Francisco, San Francisco, California.
Caroline E McCoachDepartment of Medicine, University of California at San Francisco, San Francisco, California.
Julia K RotowDepartment of Medicine, University of California at San Francisco, San Francisco, California.
Anh LeDepartment of Medicine, University of Colorado Anschutz Medical Campus, Denver, Colorado.
Niki KarachaliouCancer Biology and Precision Medicine Program Catalan Institute of Oncology Hospital Germans Trias i Pujol Badalona, Barcelona, Spain.
Rafael RosellCancer Biology and Precision Medicine Program Catalan Institute of Oncology Hospital Germans Trias i Pujol Badalona, Barcelona, Spain.
Jonathan W RiessUniversity of California Davis School of Medicine, Sacramento, California.
Robert NicholsRevolution Medicines, Redwood City, California.
Robert C DoebeleDepartment of Medicine, University of Colorado Anschutz Medical Campus, Denver, Colorado.ORCID 0000-0001-6728-6857
Trever G BivonaDepartment of Medicine, University of California at San Francisco, San Francisco, California. trever.bivona@ucsf.edu.
University of California, San Francisco · USInstitut d'Investigació en Ciències de la Salut Germans Trias i Pujol · ESUniversity of Colorado Anschutz Medical Campus · USPancreatic Cancer Action Network · USRevolution Medicines (United States) · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007618 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ANDERSON, MARK S · 1985 to 2020
$29.6M
UCSF Project 1U54CA224081 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Trever G Bivona, Jack Roth · 2017 to 2026
$12.9M
Molecular and Cellular Mechanisms in CancerT32CA108462 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GOGA, ANDREI · 2004 to 2024
$10.4M
The Cancer Target Discovery and Development Network at UCSFU01CA217882 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BANDYOPADHYAY, SOURAV, BIVONA, TREVER G · 2017 to 2021
$5.2M
Characterization of YAP as a rational companion target in lung cancerR01CA204302 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Trever G Bivona · 2017 to 2026
$3.7M
Rational Combined Inhibition of NF-kB and EGFR to Optimize Lung Cancer TreatmentR01CA169338 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BIVONA, TREVER G · 2013 to 2023
$3.4M
Discovery of Rational Companion Therapeutic Targets to Optimize Cancer TreatmentDP2CA174497 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BIVONA, TREVER G · 2012 to 2012
$2.3M
Optimizing biologically-based rational polytherapy in ALK+ lung cancerR01CA211052 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BIVONA, TREVER G · 2017 to 2021
$1.8M
Dissecting the function of PI3K/mTOR pathway activation in ROS1 fusion-mediated oncogenesis and resistance to targeted therapyF30CA210444 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI NEEL, DANA SARABETH · 2016 to 2019
$171k
Doris Duke Charitable Foundation 2018110NCI NIH HHS DP2 CA174497NCI NIH HHS F30 CA210444NCI NIH HHS R01 CA169338NCI NIH HHS R01 CA204302NCI NIH HHS R01 CA211052NCI NIH HHS T32 CA108462NCI NIH HHS U01 CA217882NCI NIH HHS U54 CA224081NIGMS NIH HHS T32 GM007618
6 · The paper itself

Abstract

Chromosomal rearrangements involving receptor tyrosine kinases (RTK) are a clinically relevant oncogenic mechanism in human cancers. These chimeric oncoproteins often contain the C-terminal kinase domain of the RTK joined

Indexed as

Adenocarcinoma of LungAnimalsAntigens, CDbeta-D-Galactoside alpha 2-6-SialyltransferaseEndosomesHEK293 CellsHumansLung NeoplasmsMAP Kinase Signaling SystemMiceMice, Inbred NODMice, SCIDNIH 3T3 CellsOncogene Proteins, FusionProtein-Tyrosine KinasesProto-Oncogene ProteinsAntigens, CDbeta-D-Galactoside alpha 2-6-SialyltransferaseOncogene Proteins, FusionProtein-Tyrosine KinasesProto-Oncogene Proteinsras ProteinsROS1 protein, humanSDC4 protein, humanSialyltransferasesSLC34A2 protein, humanSodium-Phosphate Cotransporter Proteins, Type IIbST6GAL1 protein, humanSyndecan-4

Identifiers

PMID30538120
PMCPMC6359944
OpenAlexW2905492903

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.