Evidence map›Paper›PMID 30535889›Full record

ArticleJournal of biomolecular NMR2018

Oligomeric transition and dynamics of RNA binding by the HuR RRM1 domain in solution.

Carolina Lixa, Amanda Mujo, Mariana T Q de Magalhães, Fabio C L Almeida, Luis Mauricio T R Lima, Anderson S Pinheiro

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of biomolecular NMR, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Journal of chemical information and modeling · 2025
    Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. An overview of structural approaches to study therapeutic RNAs.Frontiers in molecular biosciences · 2022
    Review
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Carolina LixaDepartment of Biochemistry, Institute of Chemistry, Federal University of Rio de Janeiro, Rio de Janeiro, 21941-909, Brazil.
Amanda MujoDepartment of Biochemistry, Institute of Chemistry, Federal University of Rio de Janeiro, Rio de Janeiro, 21941-909, Brazil.
Mariana T Q de MagalhãesDepartment of Biochemistry and Immunology, Federal University of Minas Gerais, Belo Horizonte, 31270-901, Brazil.
Fabio C L AlmeidaNational Center for Nuclear Magnetic Resonance Jiri Jonas, Institute of Medical Biochemistry, Federal University of Rio de Janeiro, Rio de Janeiro, 21941-902, Brazil.
Luis Mauricio T R LimaFaculty of Pharmacy, Federal University of Rio de Janeiro, Rio de Janeiro, 21941-590, Brazil.
Anderson S PinheiroDepartment of Biochemistry, Institute of Chemistry, Federal University of Rio de Janeiro, Rio de Janeiro, 21941-909, Brazil. pinheiro@iq.ufrj.br.ORCID http://orcid.org/0000-0001-5118-6931
Universidade Federal do Rio de Janeiro · BRUniversidade Federal de Minas Gerais · BR

Funding

Brown University Brazil Initiative Collaboration Grant
6 · The paper itself

Abstract

Human antigen R (HuR) functions as a major post-transcriptional regulator of gene expression through its RNA-binding activity. HuR is composed by three RNA recognition motifs, namely RRM1, RRM2, and RRM3. The two N-terminal RRM domains are disposed in tandem and contribute mostly to HuR interaction with adenine and uracil-rich elements (ARE) in mRNA. Here, we used a combination of NMR and electrospray ionization-ion mobility spectrometry-mass spectrometry (ESI-IMS-MS) to characterize the structure, dynamics, RNA recognition, and dimerization of HuR RRM1. Our solution structure reveals a canonical RRM fold containing a 19-residue, intrinsically disordered N-terminal extension, which is not involved in RNA binding. NMR titration results confirm the primary RNA-binding site to the two central β-strands, β1 and β3, for a cyclooxygenase 2 (Cox2) ARE I-derived, 7-nucleotide RNA ligand. We show by

Indexed as

Binding SitesDimerizationELAV-Like Protein 1HumansMass SpectrometryNuclear Magnetic Resonance, BiomolecularProtein BindingRibonucleoside Diphosphate ReductaseRNARNA-Binding ProteinsTumor Suppressor ProteinsELAV-Like Protein 1Ribonucleoside Diphosphate ReductaseRNARNA-Binding ProteinsRRM1 protein, humanTumor Suppressor ProteinsDynamicsHuRIon-mobilityNMRRNARRMStructure

Identifiers

PMID30535889
OpenAlexW2903640966

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.