Evidence map›Paper›PMID 30535734›Full record

ArticlePlant molecular biology2019

Characterization of the O-acetylserine(thiol)lyase gene family in Solanum lycopersicum L.

Danmei Liu, Juanjuan Lu, Hui Li, Juanjuan Wang, Yanxi Pei

Abstract read
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. HHorticulture research · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Comprehensive Analysis of the OASTL Gene Family in Potato (International journal of molecular sciences · 2024
    Article
  7. Growth, Quality, and Nitrogen Metabolism ofInternational journal of molecular sciences · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Transcriptomic analysis reveals the functions of HFrontiers in plant science · 2023
    Article
  12. A Hydrogen-Sulfide-Repressed Methionine SynthaseInternational journal of molecular sciences · 2022
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. HJournal of advanced research · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Danmei LiuCollege of Life Science, Shanxi University, Taiyuan, 030006, China.
Juanjuan LuCollege of Life Science, Shanxi University, Taiyuan, 030006, China.
Hui LiCollege of Life Science, Shanxi University, Taiyuan, 030006, China.
Juanjuan WangScientific Instrument Center, Shanxi University, Taiyuan, 030006, China.
Yanxi PeiCollege of Life Science, Shanxi University, Taiyuan, 030006, China. peiyanxi@sxu.edu.cn.ORCID http://orcid.org/0000-0002-8428-3399
Shanxi University · CN

Funding

National Natural Science Foundation of China 31501772Shanxi Province Science Foundation for Youths 201601D021097
6 · The paper itself

Abstract

key messageThis research demonstrated the conservation and diversification of the functions of the O-acetylserine-(thiol) lyase gene family genes in Solanum lycopersicum L. Cysteine is the first sulfur-containing organic molecule generated by plants and is the precursor of many important biomolecules and defense compounds. Cysteine and its derivatives are also essential in various redox signaling-related processes. O-acetylserine(thiol)lyase (OASTL) proteins catalyze the last step of cysteine biosynthesis. Previously, researches focused mainly on OASTL proteins which were the most abundant or possessed the authentic OASTL activity, whereas few studies have ever given a comprehensive view of the functions of all the OASTL members in one specific species. Here, we characterized 8 genes belonging to the OASTL gene family from tomato genome (SlOAS2 to SlOAS9), including the sequence analyses, subcellular localization, enzymatic activity assays, expression patterns, as well as the interaction property with SATs. Apart from SlOAS3, all the other genes encoded OASTL-like proteins. Tomato OASTLs were differentially expressed during the development of tomato plants, and their encoded proteins had diverse compartmental distributions and functions. SlOAS5 and SlOAS6 catalyzed the biogenesis of cysteine in chloroplasts and in the cytosol, respectively, and this was in consistent with their interaction abilities with SlSATs. SlOAS4 catalyzed the generation of hydrogen sulfide, similar to its Arabidopsis ortholog, DES1. SlOAS2 also functioned as an L-cysteine desulfhydrase, but its expression pattern was very different from that of SlOAS4. Additionally, SlOAS8 might be a β-cyanoalanine synthase in mitochondria, and the S-sulfocysteine synthase activity appeared lost in tomato plants. SlOAS7 exhibited a transactivational ability in yeast; while the subcellular localization of SlOAS9 was in the peroxisome and correlated with the process of leaf senescence, indicating that these two genes might have novel roles.

Indexed as

Multigene FamilyCarbon-Oxygen LyasesChloroplastsCysteineCytosolLyasesPlant ProteinsSolanum lycopersicumbeta-cyanoalanine synthaseCarbon-Oxygen LyasesCysteineLyasesO-acetylhomoserine (thiol)-lyasePlant ProteinsEnzymatic activityExpression patternOASTLSATSubcellular localizationTomato

Identifiers

PMID30535734
OpenAlexW2903869097

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.