Evidence map›Paper›PMID 30535509›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2019

Introgression reshapes recombination distribution in grapevine interspecific hybrids.

Marion Delame, Emilce Prado, Sophie Blanc, Guillaume Robert-Siegwald, Christophe Schneider, Pere Mestre, Camille Rustenholz, Didier Merdinoglu

Open access · greenAbstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
6.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 42 citations in OpenAlex.

  1. Rpv2 is part of a cluster of NLRs specific to Vitis rotundifolia and confers total resistance to grapevine downy mildew.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Marion DelameSVQV UMR-A 1131, INRA, Université de Strasbourg, 68000, Colmar, France.
Emilce PradoSVQV UMR-A 1131, INRA, Université de Strasbourg, 68000, Colmar, France.
Sophie BlancSVQV UMR-A 1131, INRA, Université de Strasbourg, 68000, Colmar, France.
Guillaume Robert-SiegwaldSVQV UMR-A 1131, INRA, Université de Strasbourg, 68000, Colmar, France.
Christophe SchneiderSVQV UMR-A 1131, INRA, Université de Strasbourg, 68000, Colmar, France.
Pere MestreSVQV UMR-A 1131, INRA, Université de Strasbourg, 68000, Colmar, France.
Camille RustenholzSVQV UMR-A 1131, INRA, Université de Strasbourg, 68000, Colmar, France.
Didier MerdinogluSVQV UMR-A 1131, INRA, Université de Strasbourg, 68000, Colmar, France. didier.merdinoglu@inra.fr.ORCID http://orcid.org/0000-0001-8568-0495
Colmar Inra Research Centre · FRInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRAgroParisTech · FRInstitut National de la Recherche Agronomique · MA

Funding

Agence Nationale de la Recherche ANR-08-GENM-007
6 · The paper itself

Abstract

key messageIn grapevine interspecific hybrids, meiotic recombination is suppressed in homeologous regions and enhanced in homologous regions of recombined chromosomes, whereas crossover rate remains unchanged when chromosome pairs are entirely homeologous. Vitis rotundifolia, an American species related to the cultivated European grapevine Vitis vinifera, has a high level of resistance to several grapevine major diseases and is consequently a valuable resource for grape breeding. However, crosses between both species most often lead to very few poorly fertile hybrids. In this context, identifying genetic and genomic features that make cross-breeding between both species difficult is essential. To this end, three mapping populations were generated by pseudo-backcrosses using V. rotundifolia as the donor parent and several V. vinifera cultivars as the recurrent parents. Genotyping-by-sequencing was used to establish high-density genetic linkage maps and to determine the genetic composition of the chromosomes of each individual. A good collinearity of the SNP positions was observed between parental maps, confirming the synteny between both species, except on lower arm of chromosome 7. Interestingly, recombination rate in V. rotundifolia × V. vinifera interspecific hybrids depends on the length of the introgressed region. It is similar to grapevine for chromosome pairs entirely homeologous. Conversely, for chromosome pairs partly homeologous, recombination is suppressed in the homeologous regions, whereas it is enhanced in the homologous ones. This balance leads to the conservation of the total genetic length of each chromosome between V. vinifera and hybrid maps, whatever the backcross level and the proportion of homeologous region. Altogether, these results provide new insight to optimize the use of V. rotundifolia in grape breeding and, more generally, to improve the introgression of gene of interest from wild species related to crops.

Indexed as

Hybridization, GeneticAllelesChromosome PaintingChromosomes, PlantCrosses, GeneticGenome, PlantGenotyping TechniquesMinisatellite RepeatsRecombination, GeneticSequence Analysis, DNASpecies SpecificityVitis

Identifiers

PMID30535509
OpenAlexW2904169645

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.