Evidence map›Paper›PMID 30535180›Full record

ArticleAnnals of botany2019

Nitrate nutrition influences multiple factors in order to increase energy efficiency under hypoxia in Arabidopsis.

Aakanksha Wany, Alok Kumar Gupta, Aprajita Kumari, Sonal Mishra, Namrata Singh, Sonika Pandey, Rhythm Vanvari, Abir U Igamberdiev, Alisdair R Fernie, Kapuganti Jagadis Gupta

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
7.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Nitrate alleviates ammonium toxicity in wheat (Plant signaling & behavior · 2021
    Article
  9. Article
  10. Review
  11. Current approaches to measure nitric oxide in plants.Journal of experimental botany · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Aakanksha WanyNational Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, India.
Alok Kumar GuptaNational Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, India.
Aprajita KumariNational Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, India.
Sonal MishraNational Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, India.
Namrata SinghNational Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, India.
Sonika PandeyNational Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, India.
Rhythm VanvariNational Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, India.
Abir U IgamberdievDepartment of Biology, Memorial University of Newfoundland, St. John's, Canada.
Alisdair R FernieMax Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Kapuganti Jagadis GuptaNational Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, India.
National Institute of Plant Genome Research · INMax Planck Institute of Molecular Plant Physiology · DEMemorial University of Newfoundland · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsNitrogen (N) levels vary between ecosystems, while the form of available N has a substantial impact on growth, development and perception of stress. Plants have the capacity to assimilate N in the form of either nitrate (NO3-) or ammonium (NH4+). Recent studies revealed that NO3- nutrition increases nitric oxide (NO) levels under hypoxia. When oxygen availability changes, plants need to generate energy to protect themselves against hypoxia-induced damage. As the effects of NO3- or NH4+ nutrition on energy production remain unresolved, this study was conducted to investigate the role of N source on group VII transcription factors, fermentative genes, energy metabolism and respiration under normoxic and hypoxic conditions.

methodsWe used Arabidopsis plants grown on Hoagland medium with either NO3- or NH4+ as a source of N and exposed to 0.8 % oxygen environment. In both roots and seedlings, we investigated the phytoglobin-nitric oxide cycle and the pathways of fermentation and respiration; furthermore, NO levels were tested using a combination of techniques including diaminofluorescein fluorescence, the gas phase Griess reagent assay, respiration by using an oxygen sensor and gene expression analysis by real-time quantitative reverse transcription-PCR methods. KEY

resultsUnder NO3- nutrition, hypoxic stress leads to increases in nitrate reductase activity, NO production, class 1 phytoglobin transcript abundance and metphytoglobin reductase activity. In contrast, none of these processes responded to hypoxia under NH4+ nutrition. Under NO3- nutrition, a decreased total respiratory rate and increased alternative oxidase capacity and expression were observed during hypoxia. Data correlated with decreased reactive oxygen species and lipid peroxidation levels. Moreover, increased fermentation and NAD+ recycling as well as increased ATP production concomitant with the increased expression of transcription factor genes HRE1, HRE2, RAP2.2 and RAP2.12 were observed during hypoxia under NO3- nutrition.

conclusionsThe results of this study collectively indicate that nitrate nutrition influences multiple factors in order to increase energy efficiency under hypoxia.

Indexed as

Energy MetabolismAnaerobiosisArabidopsisArabidopsis ProteinsNitratesNutrientsOxygenTranscription FactorsArabidopsis ProteinsNitratesNutrientsOxygenTranscription Factorsalternative oxidaseammoniumArabidopsis thalianafermentationnitratenitric oxidephytoglobin

Identifiers

PMID30535180
PMCPMC6417481
OpenAlexW2904894377

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.