Evidence map›Paper›PMID 30535023›Full record

ArticleJournal of animal science2019

Associations between variation in the ovine high glycine-tyrosine keratin-associated protein gene KRTAP20-1 and wool traits.

Hua Gong, Huitong Zhou, Lingrong Bai, Wenhao Li, Shaobin Li, Jiqing Wang, Yuzhu Luo, Jon G H Hickford

Open access · bronzeAbstract read
In one paragraph

Article in Journal of animal science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Characterisation of the OvineAnimals : an open access journal from MDPI · 2025
    Article
  3. Article
  4. Article
  5. Effects ofGenes · 2024
    Article
  6. Exploring Variation in OvineAnimals : an open access journal from MDPI · 2024
    Article
  7. OvineGenes · 2024
    Article
  8. OvineGenes · 2023
    Article
  9. Article
  10. The Complexity of the Ovine and Caprine Keratin-Associated Protein Genes.International journal of molecular sciences · 2021
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Variation inArchives animal breeding · 2019
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Hua GongInternational Wool Research Institute, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou, China.
Huitong ZhouInternational Wool Research Institute, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou, China.
Lingrong BaiAgricultural College, Ningxia University, Yinchuan, China.
Wenhao LiInternational Wool Research Institute, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou, China.
Shaobin LiInternational Wool Research Institute, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou, China.
Jiqing WangInternational Wool Research Institute, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou, China.
Yuzhu LuoInternational Wool Research Institute, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou, China.
Jon G H HickfordInternational Wool Research Institute, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou, China.
Gansu Agricultural University · CNLincoln University · NZNingxia University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The keratin-associated proteins (KAPs) are important constituents of wool fibers. Of the many mammalian KAP genes (KRTAPs) identified, KRTAP20-1 has been described in humans, but it has not been described in any other species. A search of the sheep genome using the human KRTAP20-1 sequence revealed a homologous open reading frame on chromosome 1, which would encode a high glycine-tyrosine KAP. PCR-single-stranded conformational polymorphism (PCR-SSCP) analysis identified 8 different banding patterns representing 8 unique DNA sequences (named A to H). The sequences had highest similarity to the human KRTAP20-1 sequence, and this suggests that they are variants of ovine KRTAP20-1. Among these variants, a 12-bp insertion/deletion and 6 single nucleotide poly- morphisms (SNPs), including one 5' untranslated region (UTR) SNP, one 3' UTR SNP, and 2 nonsynonymous SNPs, were detected. Variant A was found to be associated with a decrease in mean fiber diameter, fiber diameter standard deviation, and prickle factor, whereas variant C was associated with increased greasy fleece weight and decreased wool yield. These associations persisted after adjusting for the effect of 2 nearby KRTAPs (KRTAP6-3 and KRTAP22-1) that have also been reported to associate with these wool traits. This suggests that variation in KRTAP20-1 affects wool yield and mean fiber diameter-associated traits, and that this effect is unlikely to be the result of the clustering of these KRTAPs on chromosome 1.

Indexed as

AnimalsBase SequenceGenomeGlycineKeratinsPhenotypePhylogenyPolymerase Chain ReactionPolymorphism, Single NucleotidePolymorphism, Single-Stranded ConformationalSequence AlignmentSheepTyrosineWoolGlycineKeratinsTyrosine

Identifiers

PMID30535023
PMCPMC6358231
OpenAlexW2904194229

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.