Evidence map›Paper›PMID 30534987›Full record

ReviewFEMS microbiology letters2019

Decoding the ocean's microbiological secrets for marine enzyme biodiscovery.

Manuel Ferrer, Celia Méndez-García, Rafael Bargiela, Jennifer Chow, Sandra Alonso, Antonio García-Moyano, Gro E K Bjerga, Ida H Steen, Tatjana Schwabe, Charlotte Blom and 20 more

Abstract readReview
In one paragraph

Review in FEMS microbiology letters, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors.

Manuel FerrerDepartment of Applied Biocatalysis, Institute of Catalysis, Consejo Superior de Investigaciones Científicas, Marie Curie 2, 28049 Madrid, Spain.
Celia Méndez-GarcíaDepartment of Applied Biocatalysis, Institute of Catalysis, Consejo Superior de Investigaciones Científicas, Marie Curie 2, 28049 Madrid, Spain.
Rafael BargielaSchool of Natural Sciences, Bangor University, Deiniol Road, LL57 2UW Bangor, United Kingdom.
Jennifer ChowBiozentrum Klein Flottbek, Mikrobiologie & Biotechnologie, Universität Hamburg, Ohnhorststr. 18, 22609 Hamburg, Germany.
Sandra AlonsoDepartment of Applied Biocatalysis, Institute of Catalysis, Consejo Superior de Investigaciones Científicas, Marie Curie 2, 28049 Madrid, Spain.
Antonio García-MoyanoNORCE Environment, NORCE Norwegian Research Centre AS, Thormøhlens gate 55, 5008 Bergen, Norway.
Gro E K BjergaNORCE Environment, NORCE Norwegian Research Centre AS, Thormøhlens gate 55, 5008 Bergen, Norway.
Ida H SteenDepartment of Biological Sciences and KG Jebsen Centre for Deep Sea Research, University of Bergen, Thormøhlensgt 53A/B, 5020 Bergen, Norway.
Tatjana SchwabeCLIB2021 - Cluster industrielle Biotechnologie, Voelklinger Str. 4, 40219 Düsseldorf, Germany.
Charlotte BlomNovozymes A/S, Krogshoejvej 36, 2880 Bagsvaerd, Denmark.
Jan VesterNovozymes A/S, Krogshoejvej 36, 2880 Bagsvaerd, Denmark.
Andrea Weckbeckerevoxx technologies GmbH, Alfred-Nobel-Str. 10, 40789 Monheim am Rhein, Germany.
Patrick ShahgaldianSchool of Life Sciences, University of Applied Sciences and Arts Northwestern Switzerland, Hofackerstrasse 35, CH-4132 Muttenz, Switzerland.
Carla C C R de CarvalhoiBB - Institute for Bioengineering and Biosciences, Department of Bioengineering, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal.
Rolandas MeskysDepartment of Molecular Microbiology and Biotechnology, Institute of Biochemistry, Life Sciences Center, Vilnius University, Sauletekio 7, LT-10257 Vilnius, Lithuania.
Giulio ZanaroliDepartment of Civil, Chemical, Environmental and Materials Engineering (DICAM), University of Bologna, via Terracini 28, 40131 Bologna, Italy.
Frank O GlöcknerJacobs University Bremen gGmbH, Campus Ring 1, 28759 Bremen, Germany.
Antonio Fernández-GuerraJacobs University Bremen gGmbH, Campus Ring 1, 28759 Bremen, Germany.
Siva ThambisettyLondon School of Economics and Political Science, Houghton Street, WC2A 2AE London, United Kingdom.
Fernando de la CalleMicrobiology R&D Dpt., Pharma Mar, S.A., Avda. Los Reyes, 1, 28770 Colmenar Viejo, Madrid, Spain.
Olga V GolyshinaSchool of Natural Sciences, Bangor University, Deiniol Road, LL57 2UW Bangor, United Kingdom.
Michail M YakimovInstitute for Biological Resources and Marine Biotechnology, IRBIM-CNR, Spianata S. Raineri 86, 98122 Messina, Italy.
Karl-Erich JaegerInstitute of Molecular Enzyme Technology, Heinrich Heine University Düsseldorf and Forschungszentrum Jülich GmbH, Wilhelm-Johnen-Strasse, 52428 Jülich, Germany.
Alexander F YakuninSchool of Natural Sciences, Bangor University, Deiniol Road, LL57 2UW Bangor, United Kingdom.
Wolfgang R StreitBiozentrum Klein Flottbek, Mikrobiologie & Biotechnologie, Universität Hamburg, Ohnhorststr. 18, 22609 Hamburg, Germany.
Oonagh McMeelSeascape Belgium bvba, Kindermansstraat 14/19, 1000 Brussels, Belgium.
Jan-Bart CalewaertSeascape Belgium bvba, Kindermansstraat 14/19, 1000 Brussels, Belgium.
Nathalie TonnéSeascape Belgium bvba, Kindermansstraat 14/19, 1000 Brussels, Belgium.
Peter N GolyshinSchool of Natural Sciences, Bangor University, Deiniol Road, LL57 2UW Bangor, United Kingdom.
INMARE Consortium

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A global census of marine microbial life has been underway over the past several decades. During this period, there have been scientific breakthroughs in estimating microbial diversity and understanding microbial functioning and ecology. It is estimated that the ocean, covering 71% of the earth's surface with its estimated volume of about 2 × 1018 m3 and an average depth of 3800 m, hosts the largest population of microbes on Earth. More than 2 million eukaryotic and prokaryotic species are thought to thrive both in the ocean and on its surface. Prokaryotic cell abundances can reach densities of up to 1012 cells per millilitre, exceeding eukaryotic densities of around 106 cells per millilitre of seawater. Besides their large numbers and abundance, marine microbial assemblages and their organic catalysts (enzymes) have a largely underestimated value for their use in the development of industrial products and processes. In this perspective article, we identified critical gaps in knowledge and technology to fast-track this development. We provided a general overview of the presumptive microbial assemblages in oceans, and an estimation of what is known and the enzymes that have been currently retrieved. We also discussed recent advances made in this area by the collaborative European Horizon 2020 project 'INMARE'.

Indexed as

Oceans and SeasWater MicrobiologyAquatic OrganismsBacteriaBiodiversity

Identifiers

PMID30534987
PMCPMC6322442

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.