Evidence map›Paper›PMID 30534763›Full record

ArticleNanoscale2018

Self-assembly dynamics and antimicrobial activity of all l- and d-amino acid enantiomers of a designer peptide.

Zhou Ye, Xiao Zhu, Sergio Acosta, Dhiraj Kumar, Ting Sang, Conrado Aparicio

Abstract read
In one paragraph

Article in Nanoscale, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 97 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Zhou YeMDRCBB, Minnesota Dental Research Center for Biomaterials and Biomechanics, University of Minnesota, Minneapolis, Minnesota 55455, USA. apari003@umn.edu.
Xiao Zhu
Sergio Acosta
Dhiraj Kumar
Ting Sang
Conrado Aparicio
Manpower Demonstration Research Corporation · USUniversidad de Valladolid · ES

Funding

A novel peptide-enhanced class-V dental restorative system with a 3-tier fortificationR01DE026117 · NIDCR · UNIVERSITY OF MINNESOTA · PI APARICIO, CONRADO · 2016 to 2018
$1.1M
NIDCR NIH HHS R01 DE026117
6 · The paper itself

Abstract

Recent studies have shown that antimicrobial peptides (AMPs) can self-assemble into supramolecular structures, but this has been overlooked as causative of their antimicrobial activity. Also, the higher antimicrobial potency of d-enantiomers compared to l-enantiomers of AMPs cannot always be attributed to their different resistance to protease degradation. Here, we tested all l- and d-amino acid versions of GL13K, an AMP derived from a human protein, to study structural links between the AMP secondary structure, supramolecular self-assembly dynamics, and antimicrobial activity. pH dependence and the evolution of secondary structures were related to a self-assembly process with differences among these AMPs. The two GL13K enantiomers formed analogous self-assembled twisted nanoribbon structures, but d-GL13K initiated self-assembly faster and had notably higher antimicrobial potency than l-GL13K. A non-antimicrobial scrambled amino acid version of l-GL13K assembled at a much higher pH to form distinctively different self-assembled structures than l-GL13K. Our results support a functional relationship between the AMP self-assembly and their antimicrobial activity.

Indexed as

Protein Structure, SecondaryAmino AcidsAntimicrobial Cationic PeptidesCircular DichroismHumansHydrogen-Ion ConcentrationMacromolecular SubstancesMolecular ConformationOligopeptidesPeptidesStereoisomerismAmino AcidsAntimicrobial Cationic PeptidesGL13KMacromolecular SubstancesOligopeptidesPeptides

Identifiers

PMID30534763
PMCPMC6319268
OpenAlexW2900758184

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.