Evidence map›Paper›PMID 30533660›Full record

ArticleMicrobiology resource announcements2018

Draft Genome Assemblies of Five Robust Yarrowia lipolytica Strains Exhibiting High Lipid Production, Pentose Sugar Utilization, and Sugar Alcohol Secretion from Undetoxified Lignocellulosic Biomass Hydrolysates.

Caleb Walker, Seunghyun Ryu, Hyunsoo Na, Matthew Zane, Kurt LaButti, Anna Lipzen, Sajeet Haridas, Kerrie Barry, Igor V Grigoriev, Joshua Quarterman and 3 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbiology resource announcements, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Draft genome sequence ofMicrobiology resource announcements · 2023
    Article
  2. Article
  3. Article
  4. Journal of fungi (Basel, Switzerland) · 2021
    Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Caleb WalkerDepartment of Chemical and Biomolecular Engineering, The University of Tennessee, Knoxville, Tennessee, USA.
Seunghyun RyuDepartment of Chemical and Biomolecular Engineering, The University of Tennessee, Knoxville, Tennessee, USA.
Hyunsoo NaU.S. Department of Energy, The Joint Genome Institute, Walnut Creek, California, USA.
Matthew ZaneU.S. Department of Energy, The Joint Genome Institute, Walnut Creek, California, USA.
Kurt LaButtiU.S. Department of Energy, The Joint Genome Institute, Walnut Creek, California, USA.
Anna LipzenU.S. Department of Energy, The Joint Genome Institute, Walnut Creek, California, USA.
Sajeet HaridasU.S. Department of Energy, The Joint Genome Institute, Walnut Creek, California, USA.
Kerrie BarryU.S. Department of Energy, The Joint Genome Institute, Walnut Creek, California, USA.
Igor V GrigorievU.S. Department of Energy, The Joint Genome Institute, Walnut Creek, California, USA.
Joshua QuartermanThe National Center for Agricultural Utilization Research, Peoria, Illinois, USA.
Patricia SliningerThe National Center for Agricultural Utilization Research, Peoria, Illinois, USA.
Bruce DienThe National Center for Agricultural Utilization Research, Peoria, Illinois, USA.
Cong T TrinhDepartment of Chemical and Biomolecular Engineering, The University of Tennessee, Knoxville, Tennessee, USA.ORCID https://orcid.org/0000-0002-8362-725X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Screening the genetic diversity of 45 Yarrowia lipolytica strains identified five candidates with unique metabolic capability and robustness in undetoxified switchgrass hydrolysates, including superior lipid production and efficient pentose sugar utilization. Here, we report the genome sequences of these strains to study their robustness and potential to produce fuels and chemicals.

Identifiers

PMID30533660
PMCPMC6256683

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.