Evidence map›Paper›PMID 30532955›Full record

ArticleJournal of the American Chemical Society2019

Transition of Metastable Cross-α Crystals into Cross-β Fibrils by β-Turn Flipping.

Sudipta Mondal, Guy Jacoby, Michael R Sawaya, Zohar A Arnon, Lihi Adler-Abramovich, Pavel Rehak, Lela Vuković, Linda J W Shimon, Petr Král, Roy Beck and 1 more

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. RobustSmall science · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Single-crystal-to-single-crystal translation of a helical supramolecular polymer to a helical covalent polymer.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  8. The amphibian antimicrobial peptide uperin 3.5 is a cross-α/cross-β chameleon functional amyloid.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Sudipta MondalDepartment of Molecular Microbiology and Biotechnology, George S. Wise Faculty of Life Sciences , Tel Aviv University , Tel Aviv 69978 , Israel.ORCID 0000-0002-1146-8659
Guy JacobyThe Raymond and Beverly Sackler School of Physics and Astronomy , Tel Aviv University , Tel Aviv 69978 , Israel.
Michael R SawayaHoward Hughes Medical Institute, UCLA-DOE Institute, Departments of Biological Chemistry and Chemistry and Biochemistry , Box 951570, UCLA , Los Angeles , California 90095-1570 , United States.
Zohar A ArnonDepartment of Molecular Microbiology and Biotechnology, George S. Wise Faculty of Life Sciences , Tel Aviv University , Tel Aviv 69978 , Israel.ORCID 0000-0003-2915-5930
Lihi Adler-AbramovichDepartment of Oral Biology, The Goldschleger School of Dental Medicine , Tel Aviv University , Tel Aviv 69978 , Israel.ORCID 0000-0003-3433-0625
Pavel RehakDepartment of Chemistry , University of Illinois at Chicago , Chicago , Illinois 60607 , United States.
Lela VukovićDepartment of Chemistry , University of Texas at El Paso , El Paso , Texas 79968 , United States.
Linda J W ShimonDepartment of Chemical Research Support , Weizmann Institute of Science , Rehovot 76100 , Israel.ORCID 0000-0002-7861-9247
Petr KrálDepartment of Chemistry , University of Illinois at Chicago , Chicago , Illinois 60607 , United States.ORCID 0000-0003-2992-9027
Roy BeckThe Raymond and Beverly Sackler School of Physics and Astronomy , Tel Aviv University , Tel Aviv 69978 , Israel.ORCID 0000-0003-3121-4530
Ehud GazitDepartment of Molecular Microbiology and Biotechnology, George S. Wise Faculty of Life Sciences , Tel Aviv University , Tel Aviv 69978 , Israel.ORCID 0000-0001-5764-1720

Funding

Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
European Research Council 694426NIGMS NIH HHS P41 GM103403NIH HHS S10 OD021527
6 · The paper itself

Abstract

The ensemble of native, folded state was once considered to represent the global energy minimum of a given protein sequence. More recently, the discovery of the cross-β amyloid state revealed that deeper energy minima exist, often associated with pathogenic, fibrillar deposits, when the concentration of proteins reaches a critical value. Fortunately, a sizable energy barrier impedes the conversion from native to pathogenic states. However, little is known about the structure of the related transition state. In addition, there are indications of polymorphism in the amyloidogenic process. Here, we report the first evidence of the conversion of metastable cross-α-helical crystals to thermodynamically stable cross-β-sheet-like fibrils by a de novo designed heptapeptide. Furthermore, for the first time, we demonstrate at atomic resolution that the flip of a peptide plane from a type I to a type II' turn facilitates transformation to cross-β structure and assembly of a dry steric zipper. This study establishes the potential of a peptide turn, a common protein secondary structure, to serve as a principal gatekeeper between a native metastable folded state and the amyloid state.

Indexed as

Protein AggregatesAmyloidKineticsModels, MolecularPeptidesProtein FoldingProtein Structure, SecondaryThermodynamicsAmyloidPeptidesProtein Aggregates

Identifiers

PMID30532955
PMCPMC7616934

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.