Evidence map›Paper›PMID 30532746›Full record

ArticleFrontiers in microbiology2018

Environmental Drivers of Free-Living vs. Particle-Attached Bacterial Community Composition in the Mauritania Upwelling System.

Jennifer Bachmann, Tabea Heimbach, Christiane Hassenrück, Germán A Kopprio, Morten Hvitfeldt Iversen, Hans Peter Grossart, Astrid Gärdes

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

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  14. Microbial Community Resilience across Ecosystems and Multiple Disturbances.Microbiology and molecular biology reviews : MMBR · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jennifer BachmannLeibniz Centre for Tropical Marine Research (ZMT), Bremen, Germany.
Tabea HeimbachLeibniz Centre for Tropical Marine Research (ZMT), Bremen, Germany.
Christiane HassenrückLeibniz Centre for Tropical Marine Research (ZMT), Bremen, Germany.
Germán A KopprioLeibniz Centre for Tropical Marine Research (ZMT), Bremen, Germany.
Morten Hvitfeldt IversenHelmholtz Young Investigator Group SEAPUMP, Alfred Wegener Institute for Polar and Marine Research, Bremerhaven, Germany.
Hans Peter GrossartLeibniz-Institute of Freshwater Ecology and Inland Fisheries (IGB), Berlin, Germany.
Astrid GärdesLeibniz Centre for Tropical Marine Research (ZMT), Bremen, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Saharan dust input and seasonal upwelling along North-West Africa provide a model system for studying microbial processes related to the export and recycling of nutrients. This study offers the first molecular characterization of prokaryotic particle-attached (PA; >3.0 μm) and free-living (FL; 0.2-3.0 μm) players in this important ecosystem during August 2016. Environmental drivers for alpha-diversity, bacterial community composition, and differences between FL and PA fractions were identified. The ultra-oligotrophic waters off Senegal were dominated by Cyanobacteria while higher relative abundances of Alphaproteobacteria, Bacteroidetes, Verrucomicrobia, and Planctomycetes (known particle-degraders) occurred in the upwelling area. Temperature, proxy for different water masses, was the best predictor for changes in FL communities. PA community variation was best explained by temperature and ammonium. Bray Curtis dissimilarities between FL and PA were generally very high and correlated with temperature and salinity in surface waters. Greatest similarities between FL and PA occurred at the deep chlorophyll maximum, where bacterial substrate availability was likely highest. This indicates that environmental drivers do not only influence changes among FL and PA communities but also differences between them. This could provide an explanation for contradicting results obtained by different studies regarding the dissimilarity/similarity between FL and PA communities and their biogeochemical functions.

Indexed as

16S rRNA Illumina amplicon sequencingalpha diversitybiodiversityBray Curtis dissimilaritymicrobial ecologyprokaryotessalinitytemperature

Identifiers

PMID30532746
PMCPMC6265507

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.