Evidence map›Paper›PMID 30532162›Full record

ArticlePloS one2018

Identification of Lycopene epsilon cyclase (LCYE) gene mutants to potentially increase β-carotene content in durum wheat (Triticum turgidum L.ssp. durum) through TILLING.

Daniela Richaud, Claudia Stange, Agata Gadaleta, Pasqualina Colasuonno, Roberto Parada, Andrés R Schwember

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
5.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Targeting Induced Local Lesions in the WheatFrontiers in nutrition · 2022
    Article
  10. Review
  11. Article
  12. Provitamin A Biofortification of Durum Wheat through a TILLING Approach.International journal of molecular sciences · 2019
    Article
  13. IlluminaInternational journal of molecular sciences · 2019
    Article
  14. Carotenoid Pigment Content in Durum Wheat (Frontiers in plant science · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Daniela RichaudLaboratorio de Fitomejoramiento Molecular, Facultad de Agronomía e Ingeniería Forestal, Pontificia Universidad Católica de Chile, Santiago, Chile.
Claudia StangeLaboratorio de Biología Molecular Vegetal, Facultad de Ciencias, Universidad de Chile, Santiago, Chile.
Agata GadaletaDepartment of Environmental and Territorial Sciences (DiSAAT), University of Bari "Aldo Moro", Bari, Italy.
Pasqualina ColasuonnoDepartment of Environmental and Territorial Sciences (DiSAAT), University of Bari "Aldo Moro", Bari, Italy.
Roberto ParadaLaboratorio de Fitomejoramiento Molecular, Facultad de Agronomía e Ingeniería Forestal, Pontificia Universidad Católica de Chile, Santiago, Chile.
Andrés R SchwemberLaboratorio de Fitomejoramiento Molecular, Facultad de Agronomía e Ingeniería Forestal, Pontificia Universidad Católica de Chile, Santiago, Chile.ORCID 0000-0003-1862-3110
Pontificia Universidad Católica de Chile · CLUniversity of Bari Aldo Moro · ITUniversity of Chile · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Increasing β-carotene (a vitamin A precursor) content in Triticum turgidum L. ssp. durum (durum wheat) grains is important to improve pasta nutritional quality. Studies in other species show that altering the expression of LCYE genes increases the flux towards the β-β branch, accumulating higher β-carotene levels. Durum wheat is a tetraploid species that has two LCYE genes (LCYE-A and LCYE-B) associated to the A and B genomes. The objective of this work was to produce durum wheat LCYE mutants through EMS to potentially increase β-carotene content. The LCYE point mutations created with EMS were identified using a Kronos TILLING (Targeting Induced Local Lesion IN Genomes) mutant population. Specific primers that amplified exons 3 through 10 of the LCYE genes were designed and validated. To simplify the TILLING procedure, fragments were digested with CJE (Celery Juice Extract) and visualized on 2% agarose gels. 6X mutant pools were identified, which showed cleavage products and then made into 2X pools to identify mutant individuals. LCYE mutants were then sequenced and evaluated with BLOSUM62, SIFT and PSSM algorithms. Mutants with substitutions W437*, P334L and G368R in LCYE-A and P405L, G352R and T393I in LCYE-B predicted to affect protein function were selected. Substitution W437* increased β-carotene in 75% and overall total carotenoids content in leaves of the mutant 2426 (A1 mutant line), but no significant differences relative to the control were found in grains through HPLC. Finally, the increased levels of β-carotene on leaves have potential applications to improving plant resistance under contaminated environmental conditions.

Indexed as

Allelesbeta CaroteneChromatography, High Pressure LiquidGene Expression Regulation, PlantGenome, PlantHumansIntramolecular LyasesPoint MutationTriticumbeta CaroteneIntramolecular Lyaseslycopene cyclase-isomerase

Identifiers

PMID30532162
PMCPMC6287857
OpenAlexW2905195929

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.