Evidence map›Paper›PMID 30528917›Full record

ArticleWater research2019

Occurrence of microbial indicators, pathogenic bacteria and viruses in tropical surface waters subject to contrasting land use.

Shin Giek Goh, Nazanin Saeidi, Xiaoqiong Gu, Genevieve Gabrielle Rose Vergara, Liang Liang, Haoming Fang, Masaaki Kitajima, Ariel Kushmaro, Karina Yew-Hoong Gin

Abstract read
In one paragraph

Article in Water research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Energy Requirements for Loss of Viral Infectivity.Food and environmental virology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Shin Giek GohDepartment of Civil and Environmental Engineering, National University of Singapore, Singapore.
Nazanin SaeidiDepartment of Civil and Environmental Engineering, National University of Singapore, Singapore.
Xiaoqiong GuDepartment of Civil and Environmental Engineering, National University of Singapore, Singapore.
Genevieve Gabrielle Rose VergaraDepartment of Civil and Environmental Engineering, National University of Singapore, Singapore.
Liang LiangDepartment of Civil and Environmental Engineering, National University of Singapore, Singapore.
Haoming FangNUS Environmental Research Institute, National University of Singapore, Singapore.
Masaaki KitajimaDivision of Environmental Engineering, Hokkaido University, Sapporo, Hokkaido, Japan.
Ariel KushmaroSchool of Material Science and Engineering, Nanyang Technological University, Singapore.
Karina Yew-Hoong GinDepartment of Civil and Environmental Engineering, National University of Singapore, Singapore; NUS Environmental Research Institute, National University of Singapore, Singapore. Electronic address: ceeginyh@nus.edu.sg.
National University of Singapore · SGHokkaido University · JPNanyang Technological University · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fecal indicator bacteria, such as Escherichia coli (E.coli) and Enterococcus, have been widely used to indicate the presence of pathogens. However, the suitability of fecal indicator bacteria to represent health risks is still being challenged, particularly in tropical aquatic environments. The objective of this study is to understand the occurrence and prevalence of indicators and pathogens in areas with contrasting land use, as well as to identify the major correlations between indicators, pathogens and environmental parameters. The spatial and temporal variation of indicators and pathogens was studied to examine the distribution patterns for areas with different land use, and the impact of seasonal changes on microbial populations. A total of 234 water samples were sampled for two years from reservoirs and their tributaries, and tested for fecal indicator bacteria, coliphages, human specific markers, pathogenic bacteria and viruses. The prevalence of indicators and pathogens in reservoirs were generally low, while relatively high concentrations were observed in tributaries to varying degrees. Of the enteric viruses, norovirus GII was among the most prevalent and had the highest concentration. Although strong correlations were found between indicators, only relatively weak correlations were found between indicators and pathogens. The results in this study showed that none of the bacteria/phage indicators were universal predictors for pathogens. Inclusion of the alternative indicators, Methanobrevibacter smithii, Bacteroides and human polyomaviruses (HPyVs) to monitoring programs could help to determine whether the fecal source was human. The microbial distribution patterns allow the classification of sampling sites to different clusters and thus, help to identify sites which have poor water quality. This approach will be useful for water quality management to pinpoint factors that influence water quality and help to prioritize sites for restoration of water quality.

Indexed as

VirusesWater MicrobiologyBacteriaColiphagesEnvironmental MonitoringFecesHumansBacteria indicatorsColiphagesCorrelationsEnteric virusesOccurrencePathogens

Identifiers

PMID30528917
PMCPMC7112093
OpenAlexW2902902563

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.