Evidence map›Paper›PMID 30528582›Full record

ArticleCurrent biology : CB2018

Parrot Genomes and the Evolution of Heightened Longevity and Cognition.

Morgan Wirthlin, Nicholas C B Lima, Rafael Lucas Muniz Guedes, André E R Soares, Luiz Gonzaga P Almeida, Nathalia P Cavaleiro, Guilherme Loss de Morais, Anderson V Chaves, Jason T Howard, Marcus de Melo Teixeira and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in Current biology : CB, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
6.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 94 citations in OpenAlex.

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  12. Life history traits and cancer prevalence in birds.Evolution, medicine, and public health · 2024
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  14. Life history and cancer in birds: clutch size predicts cancer.bioRxiv : the preprint server for biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 12 institutions in 2 countries.

Morgan WirthlinDepartment of Behavioral Neuroscience, Oregon Health & Science University, Portland, OR 97239, USA.
Nicholas C B LimaLaboratório de Genômica e Biodiversidade, Instituto de Bioquímica Médica Leopoldo de Meis, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ 21941-902, Brazil.
Rafael Lucas Muniz GuedesLaboratório Nacional de Computação Científica, Rua Getúlio Vargas 333, Quitandinha, Petrópolis, RJ 25651-070, Brazil.
André E R SoaresLaboratório Nacional de Computação Científica, Rua Getúlio Vargas 333, Quitandinha, Petrópolis, RJ 25651-070, Brazil.
Luiz Gonzaga P AlmeidaLaboratório Nacional de Computação Científica, Rua Getúlio Vargas 333, Quitandinha, Petrópolis, RJ 25651-070, Brazil.
Nathalia P CavaleiroLaboratório Nacional de Computação Científica, Rua Getúlio Vargas 333, Quitandinha, Petrópolis, RJ 25651-070, Brazil.
Guilherme Loss de MoraisLaboratório Nacional de Computação Científica, Rua Getúlio Vargas 333, Quitandinha, Petrópolis, RJ 25651-070, Brazil.
Anderson V ChavesPrograma de Pós-graduação em Manejo e Conservação de Ecossistemas Naturais e Agrários, Instituto de Ciências Biológicas e da Saúde, Universidade Federal de Viçosa, Florestal, Minas Gerais, Brazil.
Jason T HowardLaboratory of Neurogenetics of Language, Rockefeller University, New York, NY 10065, USA; Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA.
Marcus de Melo TeixeiraNúcleo de Medicina Tropical, Faculdade de Medicina, Universidade de Brasília, Brasília, DF 70910-900, Brazil.
Patricia N SchneiderInstituto de Ciências Biológicas, Universidade Federal do Pará, Belém, PA, Brazil.
Fabrício R SantosDepartamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil.
Michael C SchatzDepartments of Computer Science and Biology, Johns Hopkins University, Baltimore, MD 21218, USA.
Maria Sueli FelipePrograma de Ciências Genômicas e Biotecnologia, Universidade Católica de Brasília e Depto. de Biologia Celular, Universidade de Brasilia, Brasilia, DF, Brazil.
Cristina Y MiyakiInstituto de Biociências, Universidade de São Paulo, R. do Matão, 277, São Paulo, SP 05508-090, Brazil.
Alexandre AleixoCoordenação de Zoologia, Museu Paraense Emilio Goeldi, Belém, PA 66040-170, Brazil.
Maria P C SchneiderInstituto de Ciências Biológicas, Universidade Federal do Pará, Belém, PA, Brazil.
Erich D JarvisLaboratory of Neurogenetics of Language, Rockefeller University, New York, NY 10065, USA; Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA.
Ana Tereza R VasconcelosLaboratório Nacional de Computação Científica, Rua Getúlio Vargas 333, Quitandinha, Petrópolis, RJ 25651-070, Brazil.
Francisco ProsdocimiLaboratório de Genômica e Biodiversidade, Instituto de Bioquímica Médica Leopoldo de Meis, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ 21941-902, Brazil. Electronic address: prosdocimi@bioqmed.ufrj.br.
Claudio V MelloDepartment of Behavioral Neuroscience, Oregon Health & Science University, Portland, OR 97239, USA. Electronic address: melloc@ohsu.edu.
Laboratório Nacional de Computação Científica · BRHoward Hughes Medical Institute · USOregon Health & Science University · USUniversidade Federal do Pará · BRUniversidade Federal do Rio de Janeiro · BRJohns Hopkins University · USMuseu Paraense Emílio Goeldi · BRUniversidade Católica de Brasília · BRUniversidade de Brasília · BRUniversidade de São Paulo · BRUniversidade Federal de Minas Gerais · BRUniversidade Federal de Viçosa · BR

Funding

Novel gene discovery in zebra finchesR21DC014432 · NIDCD · OREGON HEALTH & SCIENCE UNIVERSITY · PI MELLO, CLAUDIO V · 2016 to 2017
$421k
NIDCD NIH HHS R21 DC014432
6 · The paper itself

Abstract

Parrots are one of the most distinct and intriguing groups of birds, with highly expanded brains [1], highly developed cognitive [2] and vocal communication [3] skills, and a long lifespan compared to other similar-sized birds [4]. Yet the genetic basis of these traits remains largely unidentified. To address this question, we have generated a high-coverage, annotated assembly of the genome of the blue-fronted Amazon (Amazona aestiva) and carried out extensive comparative analyses with 30 other avian species, including 4 additional parrots. We identified several genomic features unique to parrots, including parrot-specific novel genes and parrot-specific modifications to coding and regulatory sequences of existing genes. We also discovered genomic features under strong selection in parrots and other long-lived birds, including genes previously associated with lifespan determination as well as several hundred new candidate genes. These genes support a range of cellular functions, including telomerase activity; DNA damage repair; control of cell proliferation, cancer, and immunity; and anti-oxidative mechanisms. We also identified brain-expressed, parrot-specific paralogs with known functions in neural development or vocal-learning brain circuits. Intriguingly, parrot-specific changes in conserved regulatory sequences were overwhelmingly associated with genes that are linked to cognitive abilities and have undergone similar selection in the human lineage, suggesting convergent evolution. These findings bring novel insights into the genetics and evolution of longevity and cognition, as well as provide novel targets for exploring the mechanistic basis of these traits.

Indexed as

Biological EvolutionCognitionGenomeAmazonaAnimalsLongevityMaleAmazona aestivacognitionevolutiongenomegenomicslongevityparrotPsittaciformestelomeraseultraconserved elements

Identifiers

PMID30528582
PMCPMC6393663
OpenAlexW2905441415

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.