Evidence map›Paper›PMID 30527956›Full record

SynthesisThe Lancet. Respiratory medicine2019

Genetic determinants of risk in pulmonary arterial hypertension: international genome-wide association studies and meta-analysis.

Christopher J Rhodes, Ken Batai, Marta Bleda, Matthias Haimel, Laura Southgate, Marine Germain, Michael W Pauciulo, Charaka Hadinnapola, Jurjan Aman, Barbara Girerd and 111 more

Open access · hybridAbstract readMeta-Analysis
In one paragraph

Synthesis in The Lancet. Respiratory medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 145 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
145citing papers in PubMed, 5 pooled it
10.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

145 citing papers in PubMed, 5 syntheses or guidelines pooled it, 203 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Differential expression of members of SOX family of transcription factors in failing human hearts.Translational research : the journal of laboratory and clinical medicine · 2022
    Pooled it
  5. The Journal of international medical research · 2020
    Pooled it
  6. Article
  7. Review
  8. ImpairedERJ open research · 2026
    Article
  9. Review
  10. Variation inCirculation research · 2026
    Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Observational
  17. Review
  18. Article
  19. Article
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85 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

121 authors at 20 institutions in 8 countries.

Christopher J RhodesDepartment of Medicine, Imperial College London, London, UK.
Ken BataiDepartment of Surgery, University of Arizona, Tucson, AZ, USA.
Marta BledaDepartment of Medicine, University of Cambridge, Cambridge, UK.
Matthias HaimelDepartment of Medicine, University of Cambridge, Cambridge, UK.
Laura SouthgateMolecular and Clinical Sciences Research Institute, St George's University of London, London, UK.
Marine GermainSorbonne Universités, UPMC, INSERM, Paris, France.
Michael W PauciuloHuman Genetics, Cincinnati, OH, USA.
Charaka HadinnapolaDepartment of Medicine, University of Cambridge, Cambridge, UK.
Jurjan AmanDepartment of Medicine, Imperial College London, London, UK.
Barbara GirerdUniversity Paris-Sud, Université Paris-Saclay, Le Kremlin-Bicêtre, Paris, France.
Amit AroraDepartment of Surgery, University of Arizona, Tucson, AZ, USA.
Jo KnightData Science Institute, Lancaster University, Lancaster, UK.
Ken B HanscombeGenetics and Molecular Medicine, King's College London, London, UK.
Jason H KarnesPharmacy Practice and Science, University of Arizona, Tucson, AZ, USA.
Marika KaakinenDepartment of Medicine, Imperial College London, London, UK.
Henning GallUniversity of Giessen and Marburg Lung Center, Giessen, Germany.
Anna UlrichDepartment of Medicine, Imperial College London, London, UK.
Lars HarbaumDepartment of Medicine, Imperial College London, London, UK.
Inês CebolaDepartment of Medicine, Imperial College London, London, UK.
Jorge FerrerDepartment of Medicine, Imperial College London, London, UK.
Katie LutzHuman Genetics, Cincinnati, OH, USA.
Emilia M SwietlikDepartment of Medicine, University of Cambridge, Cambridge, UK.
Ferhaan AhmadUniversity of Iowa, Iowa City, IA, USA.
Philippe AmouyelUniversity of Lille, Lille, France.
Stephen L ArcherQueen's University, Kingston, ON, Canada.
Rahul ArgulaMedical University of South Carolina, Charleston, SC, USA.
Eric D AustinVanderbilt University, Nashville, TN, USA.
David BadeschUniversity of Colorado Denver, Denver, CO, USA.
Sahil BakshiBaylor Research Institute, Plano, TX, USA.
Christopher BarnettMedstar Health, Washington, DC, USA.
Raymond BenzaAllegheny-Singer Research Institute, Pittsburgh, PA, USA.
Nitin BhattOhio State University, Columbus, OH, USA.
Harm J BogaardVU University Medical Center, Amsterdam, Netherlands.
Charles D BurgerMayo Clinic Florida, Jacksonville, FL, USA.
Murali ChakinalaWashington University, St Louis, MO, USA.
Colin ChurchGolden Jubilee National Hospital, Glasgow, UK.
John G CoghlanRoyal Free Hospital, London, UK.
Robin CondliffeRoyal Hallamshire Hospital, Sheffield, UK.
Paul A CorrisUniversity of Newcastle, Newcastle, UK.
Cesare DanesinoUniversity of Pavia, Pavia, Italy.
Stéphanie DebetteUniversity of Bordeaux, Bordeaux, France.
C Gregory ElliottIntermountain Medical Center, Murray, UT, USA.
Jean ElwingUniversity of Cincinnati, Cincinnati OH, USA.
Melanie EyriesSorbonne Universités, UPMC, INSERM, Paris, France.
Terry FortinDuke University Medical Center, Durham, NC, USA; University of Kiel, Kiel, Germany.
Andre FrankeUniversity of Kiel, Kiel, Germany.
Robert P FrantzMayo Clinic, Rochester, MN, USA.
Adaani FrostHouston Methodist Research Institute, Houston, TX, USA.
Joe G N GarciaDepartment of Medicine, University of Arizona, Tucson, AZ, USA.
Stefano GhioFondazione IRCCS Policlinico San Matteo, Pavia, Italy.
Hossein-Ardeschir GhofraniUniversity of Giessen and Marburg Lung Center, Giessen, Germany.
J Simon R GibbsNational Heart and Lung Institute, Imperial College London, London, UK.
John HarleyCAGE, Cincinnati, OH, USA.
Hua HeHuman Genetics, Cincinnati, OH, USA.
Nicholas S HillTufts-New England Medical Center, Boston, MA, USA.
Russel HirschCincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; University of Cincinnati, Cincinnati OH, USA.
Arjan C HouwelingVU University Medical Center, Amsterdam, Netherlands.
Luke S HowardNational Heart and Lung Institute, Imperial College London, London, UK.
Dunbar IvyHealth Sciences Center, University of Colorado, Aurora, CO, USA.
David G KielyRoyal Hallamshire Hospital, Sheffield, UK.
James KlingerRhode Island Hospital, Providence, RI, USA.
Gabor KovacsLudwig Boltzmann Institute for Lung Vascular Research, Graz, Austria.
Tim LahmIndiana University, Indianapolis, IN, USA.
Matthias LaudesUniversity of Kiel, Kiel, Germany.
Rajiv D MachadoUniversity of Lincoln, Lincoln, UK.
Robert V MacKenzie RossRoyal United Hospitals Bath NHS Foundation Trust, Bath, UK.
Keith MarsoloBiomedical Informatics, Cincinnati, OH, USA.
Lisa J MartinHuman Genetics, Cincinnati, OH, USA.
Shahin MoledinaGreat Ormond Street Hospital, London, UK.
David MontaniUniversity Paris-Sud, Université Paris-Saclay, Le Kremlin-Bicêtre, Paris, France.
Steven D NathanInova Heart and Vascular Institute, Falls Church, VA, USA.
Michael NewnhamDepartment of Medicine, University of Cambridge, Cambridge, UK; Ludwig Boltzmann Institute for Lung Vascular Research, Graz, Austria; Ludwig Boltzmann Institute for Lung Vascular Research, Graz, Austria.
Andrea OlschewskiLudwig Boltzmann Institute for Lung Vascular Research, Graz, Austria.
Horst OlschewskiLudwig Boltzmann Institute for Lung Vascular Research, Graz, Austria.
Ronald J OudizHarbor-UCLA Medical Center, Torrance, CA, USA.
Willem H OuwehandDepartment of Haematology, University of Cambridge, Cambridge, UK.
Andrew J PeacockGolden Jubilee National Hospital, Glasgow, UK.
Joanna Pepke-ZabaPapworth Hospital, Papworth, UK.
Zia RehmanEast Carolina University, Greenville, NC, USA.
Ivan RobbinsVanderbilt University School of Medicine, Nashville, TN, USA.
Dan M RodenVanderbilt University School of Medicine, Nashville, TN, USA.
Erika B RosenzweigColumbia University, New York, NY, USA.
Ghulam SaydainWayne State University, Detroit, MI, USA.
Laura ScelsiFondazione IRCCS Policlinico San Matteo, Pavia, Italy.
Robert SchilzUniversity Hospital of Cleveland, Cleveland, OH, USA.
Werner SeegerUniversity of Giessen and Marburg Lung Center, Giessen, Germany.
Christian M ShafferVanderbilt University School of Medicine, Nashville, TN, USA.
Robert W SimmsBoston University School of Medicine, Boston, MA, USA.
Marc SimonUniversity of Pittsburgh, Pittsburgh, PA, USA.
Olivier SitbonUniversity Paris-Sud, Université Paris-Saclay, Le Kremlin-Bicêtre, Paris, France.
Jay SuntharalingamRoyal United Hospitals Bath NHS Foundation Trust, Bath, UK.
Haiyang TangDepartment of Medicine, University of Arizona, Tucson, AZ, USA.
Alexander Y TchourbanovAmbry Genetics, Aliso Viejo, CA, USA.
Thenappan ThenappanUniversity of Minnesota, Minneapolis, MN, USA.
Fernando TorresUniversity of Texas Southwestern Medical Center, Dallas, TX, USA.
Mark R ToshnerDepartment of Medicine, University of Cambridge, Cambridge, UK.
Carmen M TreacyDepartment of Medicine, University of Cambridge, Cambridge, UK.
Anton Vonk NoordegraafVU University Medical Center, Amsterdam, Netherlands.
Quinten WaisfiszVU University Medical Center, Amsterdam, Netherlands.
Anna K WalsworthHuman Genetics, Cincinnati, OH, USA.
Robert E WalterLouisiana State University Health, Shreveport, LA, USA.
John WhartonDepartment of Medicine, Imperial College London, London, UK.
R James WhiteUniversity of Rochester Medical Center, Rochester, NY, USA.
Jeffrey WiltSpectrum Health Hospitals, Grand Rapids, MI, USA.
Stephen J WortNational Heart and Lung Institute, Imperial College London, London, UK.
Delphine YungSeattle Children's Hospital, Seattle, WA, USA.
Allan LawrieUniversity of Sheffield, Sheffield, UK.
Marc HumbertUniversity Paris-Sud, Université Paris-Saclay, Le Kremlin-Bicêtre, Paris, France.
Florent SoubrierSorbonne Universités, UPMC, INSERM, Paris, France.
David-Alexandre TrégouëtSorbonne Universités, UPMC, INSERM, Paris, France.
Inga ProkopenkoDepartment of Medicine, Imperial College London, London, UK.
Richard KittlesCity of Hope, Duarte, CA, USA.
Stefan GräfDepartment of Medicine, University of Cambridge, Cambridge, UK.
William C NicholsHuman Genetics, Cincinnati, OH, USA.
Richard C TrembathGenetics and Molecular Medicine, King's College London, London, UK.
Ankit A DesaiIndiana University, Indianapolis, IN, USA. Electronic address: ankdesai@iu.edu.
Nicholas W MorrellDepartment of Medicine, University of Cambridge, Cambridge, UK. Electronic address: nwm23@cam.ac.uk.
Martin R WilkinsDepartment of Medicine, Imperial College London, London, UK. Electronic address: m.wilkins@imperial.ac.uk.
UK NIHR BioResource Rare Diseases Consortium
UK PAH Cohort Study Consortium
US PAH Biobank Consortium
Imperial College London · GBUniversity of Cambridge · GBCenter for Human Genetics · USUniversity of Arizona · USAmsterdam UMC Location VUmc · NLUniversité Paris-Saclay · FRVanderbilt University · USInserm · FRLudwig Boltzmann Institute for Lung Vascular Research · ATGolden Jubilee National Hospital · GBIndiana University – Purdue University Indianapolis · USKiel University · DEKing's College London · GBRoyal Hallamshire Hospital · GBRoyal United Hospital Bath NHS Trust · GBUniversities of Giessen and Marburg Lung Center · DEUniversity of Cincinnati · USAlaska Heart and Vascular Institute · USAllegheny-Singer Research Institute · USAmbry Genetics (United States) · US

Funding

Vanderbilt Institute for Clinical and Translational Research (VICTR) -Identifying correlates of functional immunity in SARS-CoV-2 convalescent plasmaUL1TR002243 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Paul A. Harris, Wesley H Self · 2017 to 2026
$130.7M
VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
National Biological Sample and Data Repository for PAHR24HL105333 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI NICHOLS, WILLIAM C · 2012 to 2016
$10.1M
VESPA: Vanderbilt Electronic Systems for Pharmacogenomic AssessmentRC2GM092618 · NIGMS · VANDERBILT UNIVERSITY · PI DENNY, JOSHUA C., RODEN, DAN M · 2009 to 2010
$6.4M
Better Outcomes for Children: Promoting Excellence in Healthcare Genomics to Inform PolicyU01HG008666 · NHGRI · CINCINNATI CHILDRENS HOSP MED CTR · PI HARLEY, JOHN BARKER · 2015 to 2019
$4.2M
Novel Involvement of NAMPT and TLR4 in PAH Vascular RemodelingR01HL141387 · NHLBI · UNIVERSITY OF FLORIDA · PI Joe G. N. Garcia, Ayako Makino · 2019 to 2026
$3.8M
Pathogenic Role of IL-18 in Sickle Cell Cardiomyopathy and Inducible Ventricular TachycardiaR01HL136603 · NHLBI · UNIVERSITY OF ARIZONA · PI DESAI, ANKIT A · 2017 to 2021
$2.4M
Automated Storage and Retrieval of Biological SystemsS10RR025141 · NCRR · VANDERBILT UNIVERSITY · PI RODEN, DAN M · 2008 to 2008
$988k
British Heart Foundation FS/13/48/30453British Heart Foundation FS/15/59/31839British Heart Foundation PG/11/116/29288British Heart Foundation SP/12/12/29836Medical Research Council MC_UP_1102/20Medical Research Council MR/J011711/1Medical Research Council MR/K020919/1Medical Research Council MR/L02036X/1NCATS NIH HHS UL1 TR000445NCATS NIH HHS UL1 TR002243NCRR NIH HHS S10 RR025141NCRR NIH HHS UL1 RR024975NHGRI NIH HHS U01 HG008666NHLBI NIH HHS R01 HL136603NHLBI NIH HHS R01 HL141387NHLBI NIH HHS R24 HL105333NIGMS NIH HHS RC2 GM092618Wellcome Trust
6 · The paper itself

Abstract

backgroundRare genetic variants cause pulmonary arterial hypertension, but the contribution of common genetic variation to disease risk and natural history is poorly characterised. We tested for genome-wide association for pulmonary arterial hypertension in large international cohorts and assessed the contribution of associated regions to outcomes.

methodsWe did two separate genome-wide association studies (GWAS) and a meta-analysis of pulmonary arterial hypertension. These GWAS used data from four international case-control studies across 11 744 individuals with European ancestry (including 2085 patients). One GWAS used genotypes from 5895 whole-genome sequences and the other GWAS used genotyping array data from an additional 5849 individuals. Cross-validation of loci reaching genome-wide significance was sought by meta-analysis. Conditional analysis corrected for the most significant variants at each locus was used to resolve signals for multiple associations. We functionally annotated associated variants and tested associations with duration of survival. All-cause mortality was the primary endpoint in survival analyses.

findingsA locus near SOX17 (rs10103692, odds ratio 1·80 [95% CI 1·55-2·08], p=5·13 × 10

interpretationThis is the first study to report that common genetic variation at loci in an enhancer near SOX17 and in HLA-DPA1/DPB1 is associated with pulmonary arterial hypertension. Impairment of SOX17 function might be more common in pulmonary arterial hypertension than suggested by rare mutations in SOX17. Further studies are needed to confirm the association between HLA typing or rs2856830 genotyping and survival, and to determine whether HLA typing or rs2856830 genotyping improves risk stratification in clinical practice or trials.

fundingUK NIHR, BHF, UK MRC, Dinosaur Trust, NIH/NHLBI, ERS, EMBO, Wellcome Trust, EU, AHA, ACClinPharm, Netherlands CVRI, Dutch Heart Foundation, Dutch Federation of UMC, Netherlands OHRD and RNAS, German DFG, German BMBF, APH Paris, INSERM, Université Paris-Sud, and French ANR.

Indexed as

Pulmonary Arterial HypertensionFemaleGenetic Predisposition to DiseaseGenetic VariationGenome-Wide Association StudyGenotyping TechniquesHLA-DP alpha-ChainsHLA-DP beta-ChainsHumansMaleMiddle AgedPolymorphism, Single NucleotideRisk AssessmentSignal TransductionSOXF Transcription FactorsSurvival AnalysisHLA-DPA1 antigenHLA-DP alpha-ChainsHLA-DPB1 antigenHLA-DP beta-ChainsSOX17 protein, humanSOXF Transcription Factors

Identifiers

PMID30527956
PMCPMC6391516
OpenAlexW2902554187

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.