Evidence map›Paper›PMID 30527446›Full record

ArticleBiophysical journal2018

Single-Nanoparticle Tracking with Angstrom Localization Precision and Microsecond Time Resolution.

Jun Ando, Akihiko Nakamura, Akasit Visootsat, Mayuko Yamamoto, Chihong Song, Kazuyoshi Murata, Ryota Iino

Abstract read
In one paragraph

Article in Biophysical journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
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  6. Article
  7. Visualizing Single V-ATPase Rotation Using Janus Nanoparticles.bioRxiv : the preprint server for biology · 2024
    Article
  8. Article
  9. Direct observation of stepping rotation of V-ATPase reveals rigid component in coupling between VProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jun AndoInstitute for Molecular Science, National Institutes of Natural Sciences, Okazaki, Aichi, Japan; The Graduate University for Advanced Studies, Hayama, Kanagawa, Japan.
Akihiko NakamuraInstitute for Molecular Science, National Institutes of Natural Sciences, Okazaki, Aichi, Japan; The Graduate University for Advanced Studies, Hayama, Kanagawa, Japan.
Akasit VisootsatInstitute for Molecular Science, National Institutes of Natural Sciences, Okazaki, Aichi, Japan; The Graduate University for Advanced Studies, Hayama, Kanagawa, Japan.
Mayuko YamamotoInstitute for Molecular Science, National Institutes of Natural Sciences, Okazaki, Aichi, Japan.
Chihong SongNational Institute for Physiological Sciences, National Institutes of Natural Sciences, Okazaki, Aichi, Japan.
Kazuyoshi MurataNational Institute for Physiological Sciences, National Institutes of Natural Sciences, Okazaki, Aichi, Japan.
Ryota IinoInstitute for Molecular Science, National Institutes of Natural Sciences, Okazaki, Aichi, Japan; The Graduate University for Advanced Studies, Hayama, Kanagawa, Japan. Electronic address: iino@ims.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gold nanoparticles (AuNPs) have been used as a contrast agent for optical imaging of various single biomolecules. Because AuNPs have high scattering efficiency without photobleaching, biomolecular dynamics have been observed with nanometer localization precision and sub-millisecond time resolution. To understand the working principle of biomolecular motors in greater detail, further improvement of the localization precision and time resolution is necessary. Here, we investigated the lower limit of localization precision achievable with AuNPs and the fundamental law, which determines the localization precision. We first used objective-lens-type total internal reflection dark-field microscopy to obtain a scattering signal from an isolated AuNP. The localization precision was inversely proportional to the square root of the photon number, which is consistent with theoretical estimation. The lower limit of precision for a 40 nm AuNP was ∼0.3 nm with 1 ms time resolution and was restricted by detector saturation. To achieve higher localization precision, we designed and constructed an annular illumination total internal reflection dark-field microscopy system with an axicon lens, which can illuminate the AuNPs at high laser intensity without damaging the objective lens. In addition, we used high image magnification to avoid detector saturation. Consequently, we achieved 1.3 Å localization precision for 40 nm AuNPs and 1.9 Å localization precision for 30 nm AuNPs at 1 ms time resolution. Furthermore, even at 33 μs time resolution, localization precisions at 5.4 Å for 40 nm AuNPs and at 1.7 nm for 30 nm AuNPs were achieved. We then observed motion of head of kinesin-1 labeled with AuNP at microsecond time resolution. Transition cycles of bound/unbound states and tethered diffusion of unbound head during stepping motion on microtubule were clearly captured with higher time resolution or smaller AuNP than those used in previous studies, indicating applicability to single-molecule imaging of biomolecular motors.

Indexed as

Metal NanoparticlesMicroscopyGoldKinesinsMovementTime FactorsGoldKinesins

Identifiers

PMID30527446
PMCPMC6302141

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.