Evidence map›Paper›PMID 30525310›Full record

ArticleTransboundary and emerging diseases2019

Molecular characterization of Peste des petits ruminants viruses in the Marmara Region of Turkey.

Eda Altan, Satya Parida, Mana Mahapatra, Nuri Turan, Huseyin Yilmaz

Abstract read
In one paragraph

Article in Transboundary and emerging diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Eda AltanVeterinary Faculty, Department of Virology, University of Istanbul, Istanbul, Turkey.
Satya ParidaThe Pirbright Institute, Pirbright, Woking, Surrey, UK.ORCID https://orcid.org/0000-0001-8253-9461
Mana MahapatraThe Pirbright Institute, Pirbright, Woking, Surrey, UK.
Nuri TuranVeterinary Faculty, Department of Virology, University of Istanbul, Istanbul, Turkey.
Huseyin YilmazVeterinary Faculty, Department of Virology, University of Istanbul, Istanbul, Turkey.

Funding

Biotechnology and Biological Sciences Research Council BB/L004801/1Biotechnology and Biological Sciences Research Council BB/L013657/1;Biotechnology and Biological Sciences Research Council BBS/E/I/00007031Biotechnology and Biological Sciences Research Council BBS/E/I/00007035Biotechnology and Biological Sciences Research Council BBS/E/I/00007036Biotechnology and Biological Sciences Research Council BBS/E/I/00007037Biotechnology and Biological Sciences Research Council BBS/E/I/00007038Research Foundation of Istanbul University 10422
6 · The paper itself

Abstract

Recent outbreaks of Peste des petits ruminants (PPR) in the Marmara region of Turkey including the European part of Thrace is important due to its proximity to Europe (Greece and Bulgaria) and the potential threat of spread of PPR into mainland Europe. In order to investigate the circulation of PPRV in the region suspect clinical and necropsy samples were collected from domestic sheep (n = 211) in the Marmara region of Turkey between 2011 and 2012. PPR virus (PPRV) genome was detected in 10.4% (22 out of 211) of sheep samples by real-time RT-PCR, and PPR virus was isolated from lungs of two sheep that died from infection. Of the 22 positive samples nine were used for partial N-gene amplification and sequencing. The phylogenetic analyses indicated that the virus belongs to lineage IV, the same lineage that is circulating in eastern and central part of Turkey since its first official report in 1999. In addition, samples from 100 cattle were collected to investigate potential subclinical circulation of PPRV. However all were found to be negative by real-time RT-PCR, and also in serological tests indicating the large ruminants were likely not exposed or infected with the virus. The impact of these findings on the potential threat of spread of PPR to Europe including the first PPR outbreak in Europe in Bulgaria on 23rd June 2018 is discussed.

Indexed as

AnimalsAntibodies, ViralCattleCattle DiseasesDisease OutbreaksEnzyme-Linked Immunosorbent AssayGenome, ViralPeste-des-Petits-RuminantsPeste-des-petits-ruminants virusPhylogenyReal-Time Polymerase Chain ReactionRNA, ViralSheepSheep DiseasesTurkeyAntibodies, ViralRNA, Viralcattlephylogenetic analysisPPRPPR in the Marmara region of Turkey and Bulgariareal-time RT-PCRsero-prevalencesheep

Identifiers

PMID30525310
PMCPMC7814889

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.