Evidence map›Paper›PMID 30523388›Full record

ReviewCurrent genetics2019

SET domains and stress: uncovering new functions for yeast Set4.

Khoa Tran, Erin M Green

Abstract readReview
In one paragraph

Review in Current genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Alterations to the yeast chromatin landscape during hypoxia.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Methyltransferases: Functions and Applications.Chembiochem : a European journal of chemical biology · 2022
    Review
  8. Review
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Khoa TranDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, MD, 21250, USA.
Erin M GreenDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, MD, 21250, USA. egreen@umbc.edu.ORCID http://orcid.org/0000-0003-1800-2269

Funding

Lysine methylation at chromatin and cellular responses to stressR01GM124342 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI GREEN, ERIN · 2017 to 2021
$1.5M
National Institute of General Medical Sciences R01GM124342NIGMS NIH HHS R01 GM124342
6 · The paper itself

Abstract

Chromatin dynamics are central to the regulation of gene expression and genome stability, particularly in the presence of environmental signals or stresses that prompt rapid reprogramming of the genome to promote survival or differentiation. While numerous chromatin regulators have been implicated in modulating cellular responses to stress, gaps in our mechanistic understanding of chromatin-based changes during stress suggest that additional proteins are likely critical to these responses and the molecular details underlying their activities are unclear in many cases. We recently identified a role for the relatively uncharacterized SET domain protein Set4 in promoting cell survival during oxidative stress in Saccharomyces cerevisiae. Set4 is a member of the Set3 subfamily of SET domain proteins which are defined by the presence of a PHD finger and divergent SET domain sequences. Here, we integrate our new observations on the function of Set4 with known roles for other related family members, including yeast Set3, fly UpSET and mammalian proteins MLL5 and SETD5. We discuss outstanding questions regarding the molecular mechanisms by which these proteins control gene expression and their potential contributions to cellular responses to environmental stress.

Indexed as

Gene Expression Regulation, FungalOxidative StressPR-SET DomainsChromatinChromosomal Proteins, Non-HistoneSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsChromatinChromosomal Proteins, Non-HistoneSaccharomyces cerevisiae Proteinsset4 protein, S cerevisiaeBudding yeastChromatinGene expressionOxidative stressPHD fingerSet4SET domainStress responses

Identifiers

PMID30523388
PMCPMC6511328

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.