Evidence map›Paper›PMID 30523255›Full record

ArticleNature communications2018

Hierarchical and programmable one-pot synthesis of oligosaccharides.

Cheng-Wei Cheng, Yixuan Zhou, Wen-Harn Pan, Supriya Dey, Chung-Yi Wu, Wen-Lian Hsu, Chi-Huey Wong

Abstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. PhotocatalyticOrganic letters · 2026
    Article
  5. Review
  6. Article
  7. Review
  8. Carbohydrate Synthesis is Entering the Data-Driven Digital Era.Chemistry (Weinheim an der Bergstrasse, Germany) · 2025
    Review
  9. Expedient Assembly of MultiantennaryJournal of the American Chemical Society · 2025
    Article
  10. Stereoselective Approaches to β-Linked 2-Deoxy Sugars.Molecules (Basel, Switzerland) · 2025
    Review
  11. Expediting Glycospace Exploration: Therapeutic Glycans via Automated Synthesis.Angewandte Chemie (International ed. in English) · 2025
    Review
  12. Automated Synthesis of C1-Functionalized Oligosaccharides.Journal of the American Chemical Society · 2025
    Article
  13. Chemical Synthesis of Complex Carbohydrates.Handbook of experimental pharmacology · 2025
    Review
  14. Using tumor habitat-derived radiomic analysis during pretreatmentCancer imaging : the official publication of the International Cancer Imaging Society · 2024
    Article
  15. Comparison of glycosyl donors: a supramer approach.Beilstein journal of organic chemistry · 2024
    Article
  16. Review
  17. Review
  18. Recent Advances in Stereoselective ChemicalFrontiers in molecular biosciences · 2022
    Review
  19. Review
  20. Glycosyl Sulfonates Beyond Triflates.Chemical record (New York, N.Y.) · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Cheng-Wei ChengBioinformatics Program, Taiwan International Graduate Program, Academia Sinica, Taipei, 11529, Taiwan.ORCID http://orcid.org/0000-0003-3491-8920
Yixuan ZhouGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Wen-Harn PanInstitute of Biomedical Sciences, Academia Sinica, Taipei, 11529, Taiwan.
Supriya DeyGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Chung-Yi WuGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Wen-Lian HsuInstitute of Information Science, Academia Sinica, Taipei, 11529, Taiwan. hsu@iis.sinica.edu.tw.
Chi-Huey WongGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan. chwong@gate.sinica.edu.tw.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The programmable one-pot oligosaccharide synthesis method was designed to enable the rapid synthesis of a large number of oligosaccharides, using the software Optimer to search Building BLocks (BBLs) with defined relative reactivity values (RRVs) to be used sequentially in the one-pot reaction. However, there were only about 50 BBLs with measured RRVs in the original library and the method could only synthesize small oligosaccharides due to the RRV ordering requirement. Here, we increase the library to include 154 validated BBLs and more than 50,000 virtual BBLs with predicted RRVs by machine learning. We also develop the software Auto-CHO to accommodate more data handling and support hierarchical one-pot synthesis using fragments as BBLs generated by the one-pot synthesis. This advanced programmable one-pot method provides potential synthetic solutions for complex glycans with four successful examples demonstrated in this work.

Indexed as

SoftwareCarbohydrate SequenceComputational BiologyModels, ChemicalMolecular StructureOligosaccharidesPolysaccharidesReproducibility of ResultsOligosaccharidesPolysaccharides

Identifiers

PMID30523255
PMCPMC6283847

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.