Evidence map›Paper›PMID 30520725›Full record

ArticleeLife2018

A virus-packageable CRISPR screen identifies host factors mediating interferon inhibition of HIV.

Molly OhAinle, Louisa Helms, Jolien Vermeire, Ferdinand Roesch, Daryl Humes, Ryan Basom, Jeffrey J Delrow, Julie Overbaugh, Michael Emerman

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 117 papers.

0numbers the graph read from it
0cells of the map it votes in
117citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

117 citing papers in PubMed, 161 citations in OpenAlex.

  1. Review
  2. CypA is a molecular barrier to HIV emergence from Eastern chimpanzees.bioRxiv : the preprint server for biology · 2026
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  12. Identification of AMOTL2 as an antiviral factor that enhances the human type I interferon response against Zika virus.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  20. Article

57 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Molly OhAinleDivisions of Human Biology and Basic Sciences, Fred Hutchinson Cancer Research Center, Washington, United States.ORCID http://orcid.org/0000-0001-5138-5367
Louisa HelmsDivisions of Human Biology and Basic Sciences, Fred Hutchinson Cancer Research Center, Washington, United States.
Jolien VermeireDivisions of Human Biology and Basic Sciences, Fred Hutchinson Cancer Research Center, Washington, United States.
Ferdinand RoeschDivisions of Human Biology and Basic Sciences, Fred Hutchinson Cancer Research Center, Washington, United States.
Daryl HumesDivisions of Human Biology and Basic Sciences, Fred Hutchinson Cancer Research Center, Washington, United States.
Ryan BasomGenomics and Bioinformatics Shared Resource, Fred Hutchinson Cancer Research Center, Seattle, United States.
Jeffrey J DelrowGenomics and Bioinformatics Shared Resource, Fred Hutchinson Cancer Research Center, Seattle, United States.
Julie OverbaughDivisions of Human Biology and Basic Sciences, Fred Hutchinson Cancer Research Center, Washington, United States.
Michael EmermanDivisions of Human Biology and Basic Sciences, Fred Hutchinson Cancer Research Center, Washington, United States.ORCID https://orcid.org/0000-0002-4181-6335
Fred Hutch Cancer Center · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI EDWIN ROBERTO ORELLANA · 1988 to 2026
$104.9M
CORE--VECTOR PRODUCTIONP30DK056465 · NIDDK · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BERNSTEIN, IRWIN D · 1999 to 2014
$14.9M
VPR AND HIV INFECTIONR01AI030927 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI EMERMAN, MICHAEL · 1991 to 2020
$5.3M
VPR AND HIV INFECTIONR37AI030927 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI EMERMAN, MICHAEL · 2001 to 2010
$4.6M
TOWARDS A MORE RELEVANT MODEL OF HIV INFECTIONDP1DA039543 · NIDA · FRED HUTCHINSON CANCER RESEARCH CENTER · PI OVERBAUGH, JULIE M. · 2015 to 2019
$4.4M
NCI NIH HHS P30 CA015704NCI NIH HHS P30 CA015704-43NIAID NIH HHS CFAR New Investigator Award, P30 AI027757NIAID NIH HHS P30 AI027757NIAID NIH HHS R01 AI030927NIAID NIH HHS R01 AI30927NIAID NIH HHS R37 AI030927NIDA NIH HHS DP1 DA039543NIDDK NIH HHS CCEH Pilot Grant, DK56465NIDDK NIH HHS P30 DK056465
6 · The paper itself

Abstract

Interferon (IFN) inhibits HIV replication by inducing antiviral effectors. To comprehensively identify IFN-induced HIV restriction factors, we assembled a CRISPR sgRNA library of Interferon Stimulated Genes (ISGs) into a modified lentiviral vector that allows for packaging of sgRNA-encoding genomes Editorial note: This article has been through an editorial process in which the authors decide how to respond to the issues raised during peer review. The Reviewing Editor's assessment is that all the issues have been addressed (see decision letter).

Indexed as

Host-Pathogen InteractionsAntigens, CDAntigens, DifferentiationAntiviral Restriction FactorsBone Marrow Stromal Antigen 2Carrier ProteinsCell Line, TumorCRISPR-Cas SystemsEpithelial CellsGene EditingGene Expression RegulationGenetic VectorsGPI-Linked ProteinsHEK293 CellsHIV-1HumansAntigens, CDAntigens, DifferentiationAntiviral Restriction FactorsBone Marrow Stromal Antigen 2BST2 protein, humanCarrier ProteinsCCR5 protein, humanCXCR4 protein, humanGPI-Linked ProteinsInterferon-alphaleu-13 antigenMX2 protein, humanMyxovirus Resistance ProteinsNuclear ProteinsPhosphotransferases (Alcohol Group Acceptor)Receptors, CCR5Receptors, CXCR4Repressor ProteinsRNA-Binding ProteinsTRIM5 protein, humanTripartite Motif ProteinsUbiquitin-Protein LigasesYLPM1 protein, humanCRISPRHIVinfectious diseaseinterferon-stimulated genesmicrobiologyrestriction factorscreenvirusvirus replication

Identifiers

PMID30520725
PMCPMC6286125
OpenAlexW2949242965

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.