Evidence map›Paper›PMID 30517098›Full record

ArticlePLoS computational biology2018

Insights on the impact of mitochondrial organisation on bioenergetics in high-resolution computational models of cardiac cell architecture.

Shouryadipta Ghosh, Kenneth Tran, Lea M D Delbridge, Anthony J R Hickey, Eric Hanssen, Edmund J Crampin, Vijay Rajagopal

Abstract read
In one paragraph

Article in PLoS computational biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
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  6. Review
  7. Effects of altered cellular ultrastructure on energy metabolism in diabetic cardiomyopathy: anPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  8. Computational Modeling and Imaging of the Intracellular Oxygen Gradient.International journal of molecular sciences · 2022
    Article
  9. Article
  10. Review
  11. Review
  12. Sensing local energetics to acutely regulate mitophagy in skeletal muscle.Frontiers in cell and developmental biology · 2022
    Review
  13. Mitochondria-localized AMPK responds to local energetics and contributes to exercise and energetic stress-induced mitophagy.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  14. Article
  15. Article
  16. Article
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  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shouryadipta GhoshCell Structure and Mechanobiology Group, Dept. of Biomedical Engineering, Melbourne School of Engineering, University of Melbourne, Melbourne, Australia.ORCID 0000-0001-5764-0592
Kenneth TranAuckland Bioengineering Institute, University of Auckland, Auckland New Zealand.ORCID 0000-0002-8651-3557
Lea M D DelbridgeDepartment of Physiology, University of Melbourne, Parkville, Australia.
Anthony J R HickeySchool of Biological Sciences, University of Auckland, Auckland, New Zealand.
Eric HanssenAdvanced Microscopy Facility, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, Australia.
Edmund J CrampinSystems Biology Laboratory, School of Mathematics and Statistics, and Melbourne School of Engineering, University of Melbourne, Melbourne, Australia.ORCID 0000-0001-6569-9543
Vijay RajagopalCell Structure and Mechanobiology Group, Dept. of Biomedical Engineering, Melbourne School of Engineering, University of Melbourne, Melbourne, Australia.ORCID 0000-0002-5509-402X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent electron microscopy data have revealed that cardiac mitochondria are not arranged in crystalline columns but are organised with several mitochondria aggregated into columns of varying sizes spanning the cell cross-section. This raises the question-how does the mitochondrial arrangement affect the metabolite distributions within cardiomyocytes and what is its impact on force dynamics? Here, we address this question by employing finite element modeling of cardiac bioenergetics on computational meshes derived from electron microscope images. Our results indicate that heterogeneous mitochondrial distributions can lead to significant spatial variation across the cell in concentrations of inorganic phosphate, creatine (Cr) and creatine phosphate (PCr). However, our model predicts that sufficient activity of the creatine kinase (CK) system, coupled with rapid diffusion of Cr and PCr, maintains near uniform ATP and ADP ratios across the cell cross sections. This homogenous distribution of ATP and ADP should also evenly distribute force production and twitch duration with contraction. These results suggest that the PCr shuttle and associated enzymatic reactions act to maintain uniform force dynamics in the cell despite the heterogeneous mitochondrial organization. However, our model also predicts that under hypoxia activity of mitochondrial CK enzymes and diffusion of high-energy phosphate compounds may be insufficient to sustain uniform ATP/ADP distribution and hence force generation.

Indexed as

Models, CardiovascularAdenosine DiphosphateAdenosine TriphosphateAnimalsBiological Transport, ActiveComputational BiologyComputer SimulationCreatineCreatine KinaseDiabetic CardiomyopathiesEnergy MetabolismMaleMicroscopy, Electron, TransmissionMitochondria, HeartMyocytes, CardiacOxygen ConsumptionAdenosine DiphosphateAdenosine TriphosphateCreatineCreatine KinasePhosphocreatine

Identifiers

PMID30517098
PMCPMC6296675

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.