Evidence map›Paper›PMID 30516436›Full record

ArticleMolecular biology of the cell2019

Fer1l6 is essential for the development of vertebrate muscle tissue in zebrafish.

Josephine A Bonventre, Chelsea Holman, Aayushi Manchanda, Sara J Codding, Trisha Chau, Jacob Huegel, Carrie Barton, Robert Tanguay, Colin P Johnson

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Josephine A BonventreDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331.
Chelsea HolmanDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331.
Aayushi ManchandaMolecular and Cellular Biology Program, Oregon State University, Corvallis, OR 97331.
Sara J CoddingDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331.
Trisha ChauDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331.
Jacob HuegelDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331.
Carrie BartonDepartment of Environmental and Molecular Toxicology, Oregon State University, Corvallis, OR 97331.
Robert TanguayDepartment of Environmental and Molecular Toxicology, Oregon State University, Corvallis, OR 97331.
Colin P JohnsonDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331.
Oregon State University · US

Funding

In vivo and in vitro studies of the deafness associated protein otoferlinR01DC014588 · NIDCD · OREGON STATE UNIVERSITY · PI JOHNSON, COLIN P · 2016 to 2020
$1.7M
NIDCD NIH HHS R01 DC014588
6 · The paper itself

Abstract

The precise spatial and temporal expression of genes is essential for proper organismal development. Despite their importance, however, many developmental genes have yet to be identified. We have determined that Fer1l6, a member of the ferlin family of genes, is a novel factor in zebrafish development. We find that Fer1l6 is expressed broadly in the trunk and head of zebrafish larvae and is more restricted to gills and female gonads in adult zebrafish. Using both genetic mutant and morpholino knockdown models, we found that loss of Fer1l6 led to deformation of striated muscle tissues, delayed development of the heart, and high morbidity. Further, expression of genes associated with muscle cell proliferation and differentiation were affected. Fer1l6 was also detected in the C2C12 cell line, and unlike other ferlin homologues, we found Fer1l6 expression was independent of the myoblast-to-myotube transition. Finally, analysis of cell and recombinant protein-based assays indicate that Fer1l6 colocalizes with syntaxin 4 and vinculin, and that the putative C2 domains interact with lipid membranes. We conclude that Fer1l6 has diverged from other vertebrate ferlins to play an essential role in zebrafish skeletal and cardiac muscle development.

Indexed as

Muscle DevelopmentAnimalsCells, CulturedGene Expression Regulation, DevelopmentalMembrane LipidsMiceMorpholinosMusclesMutationQa-SNARE ProteinsTranscription, GeneticVesicular Transport ProteinsVinculinZebrafishZebrafish Proteinsfer1l6 protein, zebrafishMembrane LipidsMorpholinosQa-SNARE ProteinsVesicular Transport ProteinsVinculinZebrafish Proteins

Identifiers

PMID30516436
PMCPMC6589578
OpenAlexW2903433293

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.