Evidence map›Paper›PMID 30516133›Full record

ArticleeLife2018

Single nucleus sequencing reveals evidence of inter-nucleus recombination in arbuscular mycorrhizal fungi.

Eric Ch Chen, Stephanie Mathieu, Anne Hoffrichter, Kinga Sedzielewska-Toro, Max Peart, Adrian Pelin, Steve Ndikumana, Jeanne Ropars, Steven Dreissig, Jorg Fuchs and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it, 101 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Eric Ch ChenDepartment of Biology, University of Ottawa, Ottawa, Canada.
Stephanie MathieuDepartment of Biology, University of Ottawa, Ottawa, Canada.
Anne HoffrichterInstitute of Genetics, Faculty of Biology, Ludwig Maximilian University of Munich, Munich, Germany.
Kinga Sedzielewska-ToroInstitute of Genetics, Faculty of Biology, Ludwig Maximilian University of Munich, Munich, Germany.
Max PeartDepartment of Biology, University of Ottawa, Ottawa, Canada.
Adrian PelinDepartment of Biology, University of Ottawa, Ottawa, Canada.
Steve NdikumanaDepartment of Biology, University of Ottawa, Ottawa, Canada.
Jeanne RoparsDepartment of Biology, University of Ottawa, Ottawa, Canada.
Steven DreissigLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany.ORCID http://orcid.org/0000-0002-4766-9698
Jorg FuchsLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany.
Andreas BrachmannInstitute of Genetics, Faculty of Biology, Ludwig Maximilian University of Munich, Munich, Germany.
Nicolas CorradiDepartment of Biology, University of Ottawa, Ottawa, Canada.ORCID http://orcid.org/0000-0002-7932-7932
University of Ottawa · CALudwig-Maximilians-Universität München · DELeibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Eukaryotes thought to have evolved clonally for millions of years are referred to as ancient asexuals. The oldest group among these are the arbuscular mycorrhizal fungi (AMF), which are plant symbionts harboring hundreds of nuclei within one continuous cytoplasm. Some AMF strains (dikaryons) harbor two co-existing nucleotypes but there is no direct evidence that such nuclei recombine in this life-stage, as is expected for sexual fungi. Here, we show that AMF nuclei with distinct genotypes can undergo recombination. Inter-nuclear genetic exchange varies in frequency among strains, and despite recombination all nuclear genomes have an average similarity of at least 99.8%. The present study demonstrates that AMF can generate genetic diversity via meiotic-like processes in the absence of observable mating. The AMF dikaryotic life-stage is a primary source of nuclear variability in these organisms, highlighting its potential for strain enhancement of these symbionts.

Indexed as

Genome, FungalRecombination, GeneticCell NucleusCytoplasmDNA, FungalGenetic VariationGenotypeMycorrhizaePlantsPolymorphism, Single NucleotideSequence Analysis, DNASymbiosisDNA, Fungalarbuscular mycorrhizal fungievolutionary biologygeneticsgenomicsmeiosisrecombinationS. cerevisiaesexual reproductionsingle nucleus sequencing

Identifiers

PMID30516133
PMCPMC6281316
OpenAlexW2902197423

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.