Evidence map›Paper›PMID 30515501›Full record

ArticleMolecular omics2019

Exploratory metabolomic study to identify blood-based biomarkers as a potential screen for colorectal cancer.

Isaac Asante, Hua Pei, Eugene Zhou, Siyu Liu, Darryl Chui, EunJeong Yoo, David V Conti, Stan G Louie

Abstract read
In one paragraph

Article in Molecular omics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Isaac AsanteDepartment of Clinical Pharmacy, School of Pharmacy, University of Southern California, CA, USA. slouie@usc.edu.
Hua Pei
Eugene Zhou
Siyu Liu
Darryl Chui
EunJeong Yoo
David V Conti
Stan G Louie

Funding

Incorporating intermediate biomarkers of folate with colorectal cancerR01CA140561 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CONTI, DAVID V, SCHUMACHER, FREDRICK RAY · 2011 to 2015
$1.9M
NCI NIH HHS R01 CA140561
6 · The paper itself

Abstract

introductioncolorectal cancer (CRC) continues to be difficult to diagnose due to the lack of reliable and predictive biomarkers.

objectiveto identify blood-based biomarkers that can be used to distinguish CRC cases from controls.

methodsa workflow for untargeted followed by targeted metabolic profiling was conducted on the plasma samples of 26 CRC cases and ten healthy volunteers (controls) using liquid chromatography-mass spectrometry (LCMS). The data acquired in the untargeted scan was processed and analyzed using MarkerView™ software. The significantly different ions that distinguish CRC cases from the controls were identified using a mass-based human metabolome search. The result was further used to inform the targeted scan workflow.

resultsthe untargeted scan yielded putative biomarkers some of which were related to the folate-dependent one-carbon metabolism (FOCM). Analysis of the targeted scan found the plasma levels of nine FOCM metabolites to be significantly different between cases and controls. The classification models of the cases and controls, in both the targeted and untargeted approaches, each yielded a 97.2% success rate after cross-validation.

conclusionwe have identified plasma metabolites with screening potential to discriminate between CRC cases and controls.

Indexed as

AdultBiomarkers, TumorCarbonCase-Control StudiesColorectal NeoplasmsDiscriminant AnalysisFemaleFolic AcidHumansMaleMetabolomeMetabolomicsMiddle AgedPrincipal Component AnalysisBiomarkers, TumorCarbonFolic Acid

Identifiers

PMID30515501
PMCPMC6413524

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.