Evidence map›Paper›PMID 30514218›Full record

ArticleBMC plant biology2018

Iron and callose homeostatic regulation in rice roots under low phosphorus.

Yan Ding, Zegang Wang, Menglian Ren, Ping Zhang, Zhongnan Li, Sheng Chen, Cailin Ge, Yulong Wang

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yan DingJiangsu Key Laboratory of Crop Genetics and Physiology/ Jiangsu Key Laboratory of Crop Cultivation and Physiology, Jiangsu Co-Innovation Center for Modern Production Technology of Grain Crops, Agricultural College of Yangzhou University, Yangzhou University, 88 Daxue South Road, Yangzhou, 225009, People's Republic of China.ORCID http://orcid.org/0000-0003-3036-0579
Zegang WangCollege of Bioscience and Biotechnology, Yangzhou University, 88 Daxue South Road, Yangzhou, 225009, People's Republic of China.
Menglian RenCollege of Bioscience and Biotechnology, Yangzhou University, 88 Daxue South Road, Yangzhou, 225009, People's Republic of China.
Ping ZhangCollege of Bioscience and Biotechnology, Yangzhou University, 88 Daxue South Road, Yangzhou, 225009, People's Republic of China.
Zhongnan LiCollege of Bioscience and Biotechnology, Yangzhou University, 88 Daxue South Road, Yangzhou, 225009, People's Republic of China.
Sheng ChenCollege of Bioscience and Biotechnology, Yangzhou University, 88 Daxue South Road, Yangzhou, 225009, People's Republic of China.
Cailin GeCollege of Bioscience and Biotechnology, Yangzhou University, 88 Daxue South Road, Yangzhou, 225009, People's Republic of China. clge@yzu.edu.cn.
Yulong WangJiangsu Key Laboratory of Crop Genetics and Physiology/ Jiangsu Key Laboratory of Crop Cultivation and Physiology, Jiangsu Co-Innovation Center for Modern Production Technology of Grain Crops, Agricultural College of Yangzhou University, Yangzhou University, 88 Daxue South Road, Yangzhou, 225009, People's Republic of China. ylwang@yzu.edu.cn.
Yangzhou University · CNBengbu Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPhosphorus (Pi) deficiency induces root morphological remodeling in plants. The primary root length of rice increased under Pi deficiency stress; however, the underlying mechanism is not well understood. In this study, transcriptome analysis (RNA-seq) and Real-time quantitative PCR (qRT-PCR) techniques were combined with the determination of physiological and biochemical indexes to research the regulation mechanisms of iron (Fe) accumulation and callose deposition in rice roots, to illuminate the relationship between Fe accumulation and primary root growth under Pi deficient conditions.

resultsInduced expression of LPR1 genes was observed under low Pi, which also caused Fe accumulation, resulting in iron plaque formation on the root surface in rice; however, in contrast to Arabidopsis, low Pi promoted primary root lengthening in rice. This might be due to Fe accumulation and callose deposition being still appropriately regulated under low Pi. The down-regulated expression of Fe-uptake-related key genes (including IRT, NAS, NAAT, YSLs, OsNRAMP1, ZIPs, ARF, and Rabs) inhibited iron uptake pathways I, II, and III in rice roots under low Pi conditions. In contrast, due to the up-regulated expression of the VITs gene, Fe was increasingly stored in both root vacuoles and cell walls. Furthermore, due to induced expression and increased activity of β-1-3 glucanase, callose deposition was more controlled in low Pi treated rice roots. In addition, low Pi and low Fe treatment still caused primary root lengthening.

conclusionsThe obtained results indicate that Low phosphorus induces iron and callose homeostatic regulation in rice roots. Because of the Fe homeostatic regulation, Fe plays a small role in rice root morphological remodeling under low Pi.

Indexed as

Gene Expression ProfilingGene Expression Regulation, PlantGlucansHomeostasisIronOryzaPhosphorusPlant RootsReal-Time Polymerase Chain ReactioncalloseGlucansIronPhosphorusIron homeostasisLow phosphorusRice (Oryza sativa)Root morphology

Identifiers

PMID30514218
PMCPMC6278065
OpenAlexW2902735952

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.