Evidence map›Paper›PMID 30513663›Full record

ReviewMolecules (Basel, Switzerland)2018

A Trajectory-Based Method to Explore Reaction Mechanisms.

Saulo A Vázquez, Xose L Otero, Emilio Martinez-Nunez

Abstract readReview
In one paragraph

Review in Molecules (Basel, Switzerland), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Chemoton 2.0: Autonomous Exploration of Chemical Reaction Networks.Journal of chemical theory and computation · 2022
    Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Saulo A VázquezDepartamento de Química Física, Facultade de Química, Campus Vida, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain. saulo.vazquez@usc.es.ORCID 0000-0002-2473-4557
Xose L OteroUnidade de Bioestadística, Facultade de Medicina, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain. xoseluis.otero@usc.es.
Emilio Martinez-NunezDepartamento de Química Física, Facultade de Química, Campus Vida, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain. emilio.nunez@usc.es.ORCID 0000-0001-6221-4977

Funding

Consellería de Cultura, Educación e Ordenación Universitaria, Xunta de Galicia ED431C 2017/17Ministerio de Economía, Industria y Competitividad, Gobierno de España CTQ2014-58617-R
6 · The paper itself

Abstract

The tsscds method, recently developed in our group, discovers chemical reaction mechanisms with minimal human intervention. It employs accelerated molecular dynamics, spectral graph theory, statistical rate theory and stochastic simulations to uncover chemical reaction paths and to solve the kinetics at the experimental conditions. In the present review, its application to solve mechanistic/kinetics problems in different research areas will be presented. Examples will be given of reactions involved in photodissociation dynamics, mass spectrometry, combustion chemistry and organometallic catalysis. Some planned improvements will also be described.

Indexed as

Models, ChemicalCatalysisKineticsMolecular Dynamics SimulationThermodynamicsautomated algorithmgraph theorykinetics simulationsmolecular dynamicsstatistical rate theory

Identifiers

PMID30513663
PMCPMC6321347

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.