ArticleThe plant genome2018
Evaluation of Genetic Variation among Sorghum Varieties from Southwest China via Genome Resequencing.
Article in The plant genome, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.
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Who cites it
7 citing papers in PubMed.
- Resequencing of two elite sorghum (Sorghum bicolor (L.) Moench) hybrid parent lines reveals distinctly different genome-wide variation models.Scientific reports · 2025Article
- Evaluation of cold tolerance in sorghum germplasm from the Chishui River Basin in China: insights from germination, field trials, and physiological assays.Frontiers in plant science · 2025Article
- Identifying genetic determinants of forage sorghum [Sorghum bicolor (Moench)] adaptation through GWAS.BMC plant biology · 2024Article
- Exploring the sorghum race level diversity utilizing 272 sorghum accessions genomic resources.Frontiers in plant science · 2023Article
- Genomic resources in plant breeding for sustainable agriculture.Journal of plant physiology · 2021Review
- Genetic Diversity and Population Structure of Sorghum [Frontiers in plant science · 2021Article
- Sorghum Pan-Genome Explores the Functional Utility for Genomic-Assisted Breeding to Accelerate the Genetic Gain.Frontiers in plant science · 2021Article
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Authors and funding
5 authors.
Funding
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Abstract
Little is known regarding genomic variation among glutinous sorghum [ (L.) Moench] varieties grown in southwest China, which are primarily used to brew the popular Jiang-flavor liquor. This study evaluated genomic variation among six representative sorghum accessions via whole-genome resequencing. The evaluation revealed 2365,363 single-nucleotide polymorphisms (SNPs), 394,365 insertions and deletions, and 47,567 copy number variations among the six genomes. Chromosomes 5 and 10 showed relatively high SNP densities, whereas whole-genome diversity in this population was low. In addition, some chromosomal loci exhibited obvious selection during the breeding process. Sorghum accessions from southwest China formed an elite germplasm population compared with the findings of other geographic populations, and the elite variety 'Hongyingzi' contained 79 unique genes primarily involved in basic metabolism. The six sorghum lines contained a large number of high-confidence genes, with Hongyingzi in particular possessing 104 unique genes. These findings advance our understanding of domestication of the sorghum genome, and Chinese sorghum accessions will be valuable resources for further research and breeding improvements.
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