Evidence map›Paper›PMID 30511209›Full record

ArticleVirus genes2019

Genomic characterisation of Cuiaba and Charleville viruses: arboviruses (family Rhabdoviridae, genus Sripuvirus) infecting reptiles and amphibians.

Nikos Vasilakis, Robert B Tesh, Steven G Widen, Divya Mirchandani, Peter J Walker

Abstract read
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In one paragraph

Article in Virus genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Nikos VasilakisDepartment of Pathology, Center for Biodefence and Emerging Infectious Diseases, The University of Texas Medical Branch, Galveston, TX, USA.
Robert B TeshDepartment of Pathology, Center for Biodefence and Emerging Infectious Diseases, The University of Texas Medical Branch, Galveston, TX, USA.
Steven G WidenDepartment of Biochemistry and Molecular Biology, The University of Texas Medical Branch, Galveston, TX, USA.
Divya MirchandaniDepartment of Microbiology and Immunology, The University of Texas Medical Branch, Galveston, TX, USA.
Peter J WalkerSchool of Biological Sciences, The University of Queensland, St Lucia, QLD, Australia. peter.walker@uq.edu.au.
The University of Texas Medical Branch at Galveston · USUniversity of Queensland · AU

Funding

World Reference Center for Emerging Viruses and Arboviruses (WRCEVA)R24AI120942 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI WEAVER, SCOTT C · 2016 to 2024
$8.5M
National Institute of Allergy and Infectious Diseases R24 AI120942National Institutes of Health (US) HHSN272004/D04
6 · The paper itself

Abstract

Viruses in the family Rhabdoviridae are ecologically very diverse, infecting mammals, birds, reptiles, fish, plants and a wide range of other terrestrial and aquatic invertebrates. The genus Sripuvirus currently comprises five viruses that appear to circulate in transmission cycles involving reptiles and sandflies. Here, we report an analysis of the complete coding sequences of Cuiaba virus (CUIV), isolated from an amphibian (Bufo marinus) collected in Brazil, and Charleville virus (CHVV), isolated from sandflies (Phlebotomus sp.) and lizards (Gehyra australis), collected in Australia. CUIV and CHVV cluster phylogenetically with the sripuviruses in maximum likelihood trees generated from complete L protein (RdRp) sequences. They also share with sripuviruses unique features in genome organisation, including an additional gene (U1) between the matrix protein (M) gene and glycoprotein (G) gene, and an alternative long open reading frame near the start of the G ORF that encodes a predicted transmembrane protein. In view of their phylogenetic relationships, similar genome organisations and similar ecological characteristics, we propose the assignment of CUIV and CHVV as novel members of the genus Sripuvirus.

Indexed as

Genome, ViralAmino Acid SequenceAmphibiansAnimal DiseasesAnimalsArbovirusesArbovirus InfectionsBase SequenceEvolution, MolecularGenomicsHigh-Throughput Nucleotide SequencingPhylogenyReptilesRNA, ViralRNA, ViralCharleville virusCuiaba virusGenome architectureRhabdovirusSprivivirus

Identifiers

PMID30511209
OpenAlexW2902994806

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.