Evidence map›Paper›PMID 30509977›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Structure and activity of lipid bilayer within a membrane-protein transporter.

Weihua Qiu, Ziao Fu, Guoyan G Xu, Robert A Grassucci, Yan Zhang, Joachim Frank, Wayne A Hendrickson, Youzhong Guo

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 158 citations in OpenAlex.

  1. Review
  2. The Evolution of Lipids from Solvents to Substrates.Annual review of biophysics · 2026
    Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Advances in native cell membrane nanoparticles system.Current opinion in structural biology · 2025
    Review
  9. Structural and functional analysis of theProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Capturing the native structure of membrane proteins using vesicles.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Article
  12. Cholesterol-dependent enzyme activity of human TSPO1.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Metallic nanoparticles: a promising novel therapeutic tool against antimicrobial resistance and spread of superbugs.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2025
    Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article

30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Weihua QiuDepartment of Medicinal Chemistry, Virginia Commonwealth University, Richmond, VA 23298.
Ziao FuIntegrated Program in Cellular, Molecular, and Biomedical Studies, Columbia University, New York, NY 10032.ORCID 0000-0001-5036-1945
Guoyan G XuDepartment of Medicinal Chemistry, Virginia Commonwealth University, Richmond, VA 23298.
Robert A GrassucciDepartment of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032.
Yan ZhangDepartment of Medicinal Chemistry, Virginia Commonwealth University, Richmond, VA 23298.
Joachim FrankDepartment of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032; jf2192@cumc.columbia.edu wah2@cumc.columbia.edu yguo4@vcu.edu.
Wayne A HendricksonDepartment of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032; jf2192@cumc.columbia.edu wah2@cumc.columbia.edu yguo4@vcu.edu.
Youzhong GuoDepartment of Medicinal Chemistry, Virginia Commonwealth University, Richmond, VA 23298; jf2192@cumc.columbia.edu wah2@cumc.columbia.edu yguo4@vcu.edu.ORCID 0000-0001-7177-9603
Virginia Commonwealth University · USColumbia University · USNew York Structural Biology Center · US

Funding

TRD #3: An automated and streamlined pipeline for in-situ molecular microscopyP41GM103310 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI DE MARCO, ALEX, KIEFT, JEFFREY S · 2012 to 2021
$14.7M
Training (303-338)P41GM116799 · NIGMS · NEW YORK STRUCTURAL BIOLOGY CENTER · PI HENDRICKSON, WAYNE A. · 2016 to 2020
$7.1M
STRUCTURE ANALYSIS OF MACROMOLECULAR ASSEMBLIESR01GM029169 · NIGMS · WADSWORTH CENTER · PI FRANK, JOACHIM · 1985 to 2019
$6.1M
Proposal for an Administrative Supplement for Equipment Purchases for NIGMS Awardees NOT-GM-18-022R01GM107462 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HENDRICKSON, WAYNE A. · 2014 to 2021
$3.6M
Non-peptide Mu Opioid Receptor Selective AntagonistsR01DA024022 · NIDA · VIRGINIA COMMONWEALTH UNIVERSITY · PI ZHANG, YAN · 2009 to 2019
$3.5M
Bivalent Ligands as Chemical Probes to Study Opioid Abuse-enhanced HIV InfectionR01DA044855 · NIDA · VIRGINIA COMMONWEALTH UNIVERSITY · PI HAUSER, KURT F, ZHANG, YAN · 2017 to 2021
$2.7M
Proposal for an Administrative Supplement for Equipment Purchases for NIGMS Awardees NOT-GM-22-017R01GM132329 · NIGMS · VIRGINIA COMMONWEALTH UNIVERSITY · PI GUO, YOUZHONG · 2019 to 2022
$1.9M
Acquisition of Detector for JEOL 3200 FSC Electron MicroscopeS10OD019994 · OD · NEW YORK STRUCTURAL BIOLOGY CENTER · PI CARRAGHER, BRIDGET OLIVIA · 2015 to 2015
$600k
Howard Hughes Medical InstituteNIDA NIH HHS R01 DA024022NIDA NIH HHS R01 DA044855NIGMS NIH HHS P41 GM103310NIGMS NIH HHS P41 GM116799NIGMS NIH HHS R01 GM029169NIGMS NIH HHS R01 GM107462NIGMS NIH HHS R01 GM132329NIH HHS S10 OD019994
6 · The paper itself

Abstract

Membrane proteins function in native cell membranes, but extraction into isolated particles is needed for many biochemical and structural analyses. Commonly used detergent-extraction methods destroy naturally associated lipid bilayers. Here, we devised a detergent-free method for preparing cell-membrane nanoparticles to study the multidrug exporter AcrB, by cryo-EM at 3.2-Å resolution. We discovered a remarkably well-organized lipid-bilayer structure associated with transmembrane domains of the AcrB trimer. This bilayer patch comprises 24 lipid molecules; inner leaflet chains are packed in a hexagonal array, whereas the outer leaflet has highly irregular but ordered packing. Protein side chains interact with both leaflets and participate in the hexagonal pattern. We suggest that the lipid bilayer supports and harmonizes peristaltic motions through AcrB trimers. In AcrB D407A, a putative proton-relay mutant, lipid bilayer buttresses protein interactions lost in crystal structures after detergent-solubilization. Our detergent-free system preserves lipid-protein interactions for visualization and should be broadly applicable.

Indexed as

ATP-Binding Cassette, Sub-Family C ProteinsCell MembraneCrystallography, X-RayDetergentsEscherichia coliEscherichia coli ProteinsLipid BilayersNanoparticlesProtein ConformationAcrB protein, E coliATP-Binding Cassette, Sub-Family C ProteinsDetergentsEscherichia coli ProteinsLipid BilayersAcrBcryo-EMnanoparticlephospholipidstyrene maleic acid copolymer

Identifiers

PMID30509977
PMCPMC6304963
OpenAlexW2902146656

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.