Evidence map›Paper›PMID 30509175›Full record

ArticleBMC genomics2018

Corn dried distillers grains with solubles (cDDGS) in the diet of pigs change the expression of adipose genes that are potential therapeutic targets in metabolic and cardiovascular diseases.

Maria Oczkowicz, Tomasz Szmatoła, Małgorzata Świątkiewicz, Klaudia Pawlina-Tyszko, Artur Gurgul, Tomasz Ząbek

Abstract read
In one paragraph

Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Maria OczkowiczDepartment of Molecular Biology of Animals, National Research Institute of Animal Production, ul Krakowska 1, 32-083 Balice, Cracow, Poland. maria.oczkowicz@izoo.krakow.pl.ORCID http://orcid.org/0000-0001-8975-0200
Tomasz SzmatołaDepartment of Molecular Biology of Animals, National Research Institute of Animal Production, ul Krakowska 1, 32-083 Balice, Cracow, Poland.
Małgorzata ŚwiątkiewiczDepartment of Nutrition Physiology, National Research Institute of Animal Production, Cracow, Poland.
Klaudia Pawlina-TyszkoDepartment of Molecular Biology of Animals, National Research Institute of Animal Production, ul Krakowska 1, 32-083 Balice, Cracow, Poland.
Artur GurgulDepartment of Molecular Biology of Animals, National Research Institute of Animal Production, ul Krakowska 1, 32-083 Balice, Cracow, Poland.
Tomasz ZąbekDepartment of Molecular Biology of Animals, National Research Institute of Animal Production, ul Krakowska 1, 32-083 Balice, Cracow, Poland.

Funding

National Science Center Poland This research was financed by the National Science Center Poland (grant no 2014/13/B/NZ9/02134)
6 · The paper itself

Abstract

backgroundCorn dried distillers grains with solubles (cDDGS) are a byproduct of biofuel and alcohol production. cDDGS have been used in pig feed for many years, because they are readily available and rich in protein, fiber, unsaturated fatty acids and phytosterols. However, feed mixtures too high in cDDGS result in the worsening of backfat quality. We performed RNA-sequencing analysis of backfat from crossbred pigs fed different diets. The diets were isoenergetic but contained different amounts of cDDGS and various sources of fats. The animals were divided into four dietary groups during the two months of experimentation: group I (control (-cDDGS+rapeseed oil)), group II (+cDDGS+rapeseed oil), group III (+cDDGS+beef tallow), and group IV (+cDDGS+coconut oil). The aim of the present experiment was to evaluate changes in the backfat transcriptome of pigs fed isoenergetic diets that differed in cDDGS presence.

resultsVia DESeq2 software, we identified 93 differentially expressed genes (DEGs) between groups I and II, 13 between groups I and III, and 125 between groups I and IV. DEGs identified between group I (-cDDGS+rapeseed oil) and group II (+cDDGS+rapeseed oil) were highly overrepresented in several KEGG pathways: metabolic pathways (FDR < 1.21e-06), oxidative phosphorylation (FDR < 0.00189), fatty acid biosynthesis (FDR < 0.00577), Huntington's disease (FDR < 0.00577), fatty acid metabolism (FDR < 0.0112), Parkinson's disease (FDR < 0.0151), non-alcoholic fatty liver disease (NAFLD) (FDR < 0.016), Alzheimer's disease (FDR < 0.0211) and complement and coagulation cascades (FDR < 0.02).

conclusionsWe observed that the addition of cDDGS positively affects the expression of several genes that have been recently proposed as potential targets for the treatment of obesity, diabetes, cardiovascular disease, and Alzheimer's disease (e.g., FASN, AACS, ALAS1, HMGCS1, and VSIG4). Thus, our results support the idea of including cDDGS into the diets of companion animals and humans and encourage research into the bioactive ingredients of cDDGS.

Indexed as

Diet5-Aminolevulinate SynthetaseAdipose TissueAnimal FeedAnimalsCardiovascular DiseasesEdible GrainFatty Acid Synthase, Type IGene Expression RegulationMetabolic DiseasesOxidative PhosphorylationPlant OilsProtein Interaction MapsReceptors, IgERNASequence Analysis, RNA5-Aminolevulinate SynthetaseFatty Acid Synthase, Type IPlant OilsReceptors, IgERNAAlzheimer’sBackfatcDDGSCVDMetabolic diseasesObesityPigsRNA-seq

Identifiers

PMID30509175
PMCPMC6276254

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.