Evidence map›Paper›PMID 30508276›Full record

ArticleCurrent protocols in molecular biology2019

Differential Radial Capillary Action of Ligand Assay (DRaCALA).

Anna B Seminara, Asan Turdiev, Husan Turdiev, Vincent T Lee

Abstract read
In one paragraph

Article in Current protocols in molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Bacterial cell volume regulation and the importance of cyclic di-AMP.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  2. Article
  3. The Knowns and Unknowns in Protein-Metabolite Interactions.International journal of molecular sciences · 2023
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Anna B SeminaraDepartment of Cell Biology and Molecular Genetics, University of Maryland at College Park, College Park, Maryland.
Asan TurdievDepartment of Cell Biology and Molecular Genetics, University of Maryland at College Park, College Park, Maryland.
Husan TurdievDepartment of Cell Biology and Molecular Genetics, University of Maryland at College Park, College Park, Maryland.
Vincent T LeeDepartment of Cell Biology and Molecular Genetics, University of Maryland at College Park, College Park, Maryland.

Funding

Catheter associated urinary tract infection by Pseudomonas aeruginosaR01AI110740 · NIAID · UNIV OF MARYLAND, COLLEGE PARK · PI LEE, VINCENT T · 2016 to 2020
$2.0M
Molecular mechanisms of the stringent response in Mycobacterium tuberculosisR21AI133670 · NIAID · UNIV OF MARYLAND, COLLEGE PARK · PI BRIKEN, VOLKER, LEE, VINCENT T · 2017 to 2018
$410k
NIAID NIH HHS R01 AI110740NIAID NIH HHS R21 AI133670
6 · The paper itself

Abstract

Protein interactions with nucleic acids are important for the synthesis, regulation, and stability of macromolecules. While a number of assays are available for interrogating these interactions, the differential radial capillary action of ligand assay (DRaCALA) has been developed as an easy and flexible platform that allows for the study of individual interactions when carrying out high-throughput screening for novel binding proteins and small molecule inhibitors. In this article, we describe the principle of DRaCALA and methods that utilize DRaCALA to determine the affinity and specificity of individual protein-nucleic acid interactions as well as uses for screening for binding proteins and chemical inhibitors. © 2018 by John Wiley & Sons, Inc.

Indexed as

High-Throughput Screening AssaysLigandsNucleic AcidsProtein BindingProteinsSensitivity and SpecificityLigandsNucleic AcidsProteinsbinding assaydissociation constant (Kd)high-throughput screeningoff-rate (koff)protein-nucleic acid interactionsradiolabeled ligand

Identifiers

PMID30508276
PMCPMC6422699

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.