Evidence map›Paper›PMID 30507059›Full record

ArticleEnvironmental microbiology2019

A shared limiting resource leads to competitive exclusion in a cross-feeding system.

Sarah P Hammarlund, Jeremy M Chacón, William R Harcombe

Abstract read
In one paragraph

Article in Environmental microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

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  20. Minorities drive growth resumption in cross-feeding microbial communities.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sarah P HammarlundDepartment of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN, USA.ORCID 0000-0003-1351-5161
Jeremy M ChacónDepartment of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN, USA.
William R HarcombeDepartment of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN, USA.

Funding

Systems biology and the evolutionary dynamics in a synthetic microbial communityR01GM121498 · NIGMS · UNIVERSITY OF MINNESOTA · PI HARCOMBE, WILLIAM · 2017 to 2021
$1.5M
NIGMS NIH HHS R01 GM121498NIH HHS GM121498-01A1
6 · The paper itself

Abstract

Species interactions and coexistence are often dependent upon environmental conditions. When two cross-feeding bacteria exchange essential nutrients, the addition of a cross-fed nutrient to the environment can release one species from its dependence on the other. Previous studies suggest that continued coexistence depends on relative growth rates: coexistence is maintained if the slower-growing species is released from its dependence on the other, but if the faster-growing species is released, the slower-growing species will be lost (a hypothesis that we call 'feed the faster grower' or FFG). Using invasion-from-rare experiments with two reciprocally cross-feeding bacteria, genome-scale metabolic modelling and classical ecological models, we explored the potential for coexistence when one cross-feeder became independent. We found that whether nutrient addition shifted an interaction from mutualism to commensalism or parasitism depended on whether the nutrient that limited total growth was required by one or both species. Parasitism resulted when both species required the growth-limiting resource. Importantly, coexistence was only lost when the interaction became parasitism, and the obligate species had a slower growth rate. Under these restricted conditions, the FFG hypothesis applied. Our results contribute to a mechanistic understanding of how resources can be manipulated to alter interactions and coexistence in microbial communities.

Indexed as

BacteriaEcosystemGenome, BacterialModels, BiologicalModels, TheoreticalNutrientsNutrients

Identifiers

PMID30507059
PMCPMC6634945

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.