Evidence map›Paper›PMID 30506600›Full record

ArticleMolecular microbiology2019

Sulfur availability for Vibrio fischeri growth during symbiosis establishment depends on biogeography within the squid light organ.

Nathan P Wasilko, Jessie Larios-Valencia, Caroline H Steingard, Briana M Nunez, Subhash C Verma, Tim Miyashiro

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. Lighting the way: how theJournal of bacteriology · 2024
    Review
  6. Journal of bacteriology · 2024
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  10. Article
  11. Article
  12. The type-VI secretion system of the beneficial symbiontMicrobiology (Reading, England) · 2023
    Review
  13. Article
  14. GcvB Regulon Revealed by Transcriptomic and Proteomic Analysis inInternational journal of molecular sciences · 2022
    Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Nathan P WasilkoDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, 410 South Frear Laboratory, University Park, PA, 16802, USA.
Jessie Larios-ValenciaDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, 410 South Frear Laboratory, University Park, PA, 16802, USA.
Caroline H SteingardDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, 410 South Frear Laboratory, University Park, PA, 16802, USA.
Briana M NunezDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, 410 South Frear Laboratory, University Park, PA, 16802, USA.
Subhash C VermaDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, 410 South Frear Laboratory, University Park, PA, 16802, USA.
Tim MiyashiroDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, 410 South Frear Laboratory, University Park, PA, 16802, USA.ORCID 0000-0002-5016-1641
Pennsylvania State University · US

Funding

Analysis of quorum-signaling crosstalk within the squid-vibrio symbiosisR00GM097032 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI MIYASHIRO, TIMOTHY · 2013 to 2015
$743k
NIGMS NIH HHS R00 GM097032NIH HHS GM097032
6 · The paper itself

Abstract

The fitness of host-associated microbes depends on their ability to access nutrients in vivo. Identifying these mechanisms is significant for understanding how microbes have evolved to fill specific ecological niches within a host. Vibrio fischeri is a bioluminescent bacterium that colonizes and proliferates within the light organ of the Hawaiian bobtail squid, which provides an opportunity to study how bacteria grow in vivo. Here, the transcription factor CysB is shown to be necessary for V. fischeri both to grow on several sulfur sources in vitro and to establish symbiosis with juvenile squid. CysB is also found to regulate several genes involved in sulfate assimilation and to contribute to the growth of V. fischeri on cystine, which is the oxidized form of cysteine. A mutant that grows on cystine but not sulfate could establish symbiosis, suggesting that V. fischeri acquires nutrients related to this compound within the host. Finally, CysB-regulated genes are shown to be differentially expressed among the V. fischeri populations occupying the various colonization sites found within the light organ. Together, these results suggest the biogeography of V. fischeri populations within the squid light organ impacts the physiology of this symbiotic bacterium in vivo through CysB-dependent gene regulation.

Indexed as

Gene Expression Regulation, BacterialSymbiosisAliivibrio fischeriAnimalsAnimal StructuresBacterial ProteinsDecapodiformesSulfurBacterial ProteinsCysB protein, BacteriaSulfur

Identifiers

PMID30506600
PMCPMC6417962
OpenAlexW2902792043

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.