Evidence map›Paper›PMID 30505948›Full record

ArticlemSystems

Ribosome Profiling Reveals HSP90 Inhibitor Effects on Stage-Specific Protein Synthesis in

Eugenia Bifeld, Stephan Lorenzen, Katharina Bartsch, Juan-José Vasquez, T Nicolai Siegel, Joachim Clos

Open access · goldAbstract read
In one paragraph

Article in mSystems. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 27 citations in OpenAlex.

  1. RNA synthesis inMicrobiology spectrum · 2025
    Article
  2. Article
  3. Article
  4. Refinement ofGenes · 2023
    Article
  5. Article
  6. Review
  7. Promastigote-to-Amastigote Conversion inPathogens (Basel, Switzerland) · 2022
    Review
  8. Finding Correlations Between mRNA and Protein Levels inFrontiers in cellular and infection microbiology · 2022
    Review
  9. Article
  10. Article
  11. Insights intoVeterinary sciences · 2021
    Review
  12. TheGenes · 2020
    Article
  13. Article
  14. Computational and structural biotechnology journal · 2020
    Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Eugenia BifeldLeishmaniasis Group, Bernhard Nocht Institute for Tropical Medicine, Hamburg, Germany.
Stephan LorenzenBioinformatics Unit, Bernhard Nocht Institute for Tropical Medicine, Hamburg, Germany.
Katharina BartschLeishmaniasis Group, Bernhard Nocht Institute for Tropical Medicine, Hamburg, Germany.
Juan-José VasquezResearch Center for Infectious Diseases, University of Würzburg, Würzburg, Germany.
T Nicolai SiegelResearch Center for Infectious Diseases, University of Würzburg, Würzburg, Germany.
Joachim ClosLeishmaniasis Group, Bernhard Nocht Institute for Tropical Medicine, Hamburg, Germany.ORCID https://orcid.org/0000-0003-4377-8173
Bernhard Nocht Institute for Tropical Medicine · DEUniversity of Würzburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 90-kDa heat shock protein (HSP90) of eukaryotes is a highly abundant and essential chaperone required for the maturation of regulatory and signal proteins. In the protozoan parasite Leishmania donovani, causative agent of the fatal visceral leishmaniasis, HSP90 activity is essential for cell proliferation and survival. Even more importantly, its inhibition causes life cycle progression from the insect stage to the pathogenic, mammalian stage. To unravel the molecular impact of HSP90 activity on the parasites' gene expression, we performed a ribosome profiling analysis of L. donovani, comparing genome-wide protein synthesis patterns in the presence and absence of the HSP90-specific inhibitor radicicol and an ectopically expressed radicicol-resistant HSP90 variant. We find that ribosome-protected RNA faithfully maps open reading frames and represents 97% of the annotated protein-coding genes of L. donovani. Protein synthesis was found to correlate poorly with RNA steady-state levels, indicating a regulated translation as primary mechanism for HSP90-dependent gene expression. The results confirm inhibitory effects of HSP90 on the synthesis of

Indexed as

HSP90Leishmania donovaniradicicolribosome profiling

Identifiers

PMID30505948
PMCPMC6247020
OpenAlexW2901416404

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.