Evidence map›Paper›PMID 30504897›Full record

ArticleThe ISME journal2019

Resuscitation of anammox bacteria after >10,000 years of dormancy.

Guibing Zhu, Shanyun Wang, Cheng Wang, Liguang Zhou, Siyan Zhao, Yixiao Li, Fangbai Li, Mike S M Jetten, Yonglong Lu, Lorenz Schwark

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 80 citations in OpenAlex.

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  12. Geochemical transition zone powering microbial growth in subsurface sediments.Proceedings of the National Academy of Sciences of the United States of America · 2020
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  13. Origin and Evolution of Polycyclic Triterpene Synthesis.Molecular biology and evolution · 2020
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Guibing ZhuResearch Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China. gbzhu@rcees.ac.cn.ORCID http://orcid.org/0000-0001-7227-8157
Shanyun WangResearch Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China.
Cheng WangResearch Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China.
Liguang ZhouResearch Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China.
Siyan ZhaoResearch Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China.
Yixiao LiResearch Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China.
Fangbai LiGuangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Sciences and Technology, Guangzhou, 510650, China.
Mike S M JettenDepartment of Microbiology, Radboud University, Nijmegen, The Netherlands.
Yonglong LuResearch Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China.
Lorenz SchwarkInstitute for Geosciences, University of Kiel, D-24098, Kiel, Germany. ls@gpi.uni-kiel.de.
Chinese Academy of Sciences · CNCurtin University · AUGuangdong Academy of Sciences · CNRadboud University Nijmegen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Water is essential for life on Earth, and an important medium for microbial energy and metabolism. Dormancy is a state of low metabolic activity upon unfavorable conditions. Many microorganisms can switch to a metabolically inactive state after water shortage, and recover once the environmental conditions become favorable again. Here, we resuscitated dormant anammox bacteria from dry terrestrial ecosystems after a resting period of >10 ka by addition of water without any other substrates. Isotopic-tracer analysis showed that water induced nitrate reduction yielding sufficient nitrite as substrate and energy for activating anammox bacteria. Subsequently, dissimilatory nitrate reduction to ammonium (DNRA) provided the substrate ammonium for anammox bacteria. The ammonium and nitrite formed were used to produce dinitrogen gas. High throughput sequencing and network analysis identified Brocadia as the dominant anammox species and a Jettenia species seemed to connect the other community members. Under global climate change, increasing precipitation and soil moisture may revive dormant anammox bacteria in arid soils and thereby impact global nitrogen and carbon cycles.

Indexed as

Ammonium CompoundsBacteriaEcosystemNitritesOxidation-ReductionSoilSoil MicrobiologyAmmonium CompoundsNitritesSoil

Identifiers

PMID30504897
PMCPMC6461854
OpenAlexW2903239225

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.