Evidence map›Paper›PMID 30504769›Full record

SynthesisNature communications2018

Genome-wide association meta-analysis yields 20 loci associated with gallstone disease.

Egil Ferkingstad, Asmundur Oddsson, Solveig Gretarsdottir, Stefania Benonisdottir, Gudmar Thorleifsson, Aimee M Deaton, Stefan Jonsson, Olafur A Stefansson, Gudmundur L Norddahl, Florian Zink and 22 more

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 7 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 7 pooled it
9.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 7 syntheses or guidelines pooled it, 112 citations in OpenAlex.

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  20. Alpha-1 Antitrypsin Inclusions Sequester GRP78 in a Bile Acid-Inducible Manner.Liver international : official journal of the International Association for the Study of the Liver · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 3 institutions in 1 country.

Egil FerkingstaddeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.ORCID http://orcid.org/0000-0001-8090-7988
Asmundur OddssondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.ORCID http://orcid.org/0000-0002-4606-5163
Solveig GretarsdottirdeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Stefania BenonisdottirdeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Gudmar ThorleifssondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Aimee M DeatondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Stefan JonssondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Olafur A StefanssondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Gudmundur L NorddahldeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Florian ZinkdeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Gudny A ArnadottirdeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.ORCID http://orcid.org/0000-0001-6571-423X
Bjarni GunnarssondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Gisli H HalldorssondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.ORCID http://orcid.org/0000-0001-7067-9862
Anna HelgadottirdeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.ORCID http://orcid.org/0000-0002-1806-2467
Brynjar O JenssondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Ragnar P KristjanssondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Gardar SveinbjornssondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
David A SverrissondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Gisli MassondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Isleifur OlafssonDepartment of Clinical Biochemistry, Landspítali University Hospital, Reykjavik, 101, Iceland.
Gudmundur I EyjolfssonLaboratory in Mjódd (RAM), Reykjavik, 109, Iceland.
Olof SigurdardottirDepartment of Clinical Biochemistry, Akureyri Hospital, Akureyri, 600, Iceland.
Hilma HolmdeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Ingileif JonsdottirdeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Sigurdur OlafssonDepartment of Internal Medicine, Landspitali University Hospital, Reykjavik, 101, Iceland.
Thora SteingrimsdottirFaculty of Medicine, University of Iceland, Reykjavik, 101, Iceland.
Thorunn RafnardeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.ORCID http://orcid.org/0000-0003-0491-7046
Einar S BjornssonFaculty of Medicine, University of Iceland, Reykjavik, 101, Iceland.
Unnur ThorsteinsdottirdeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.
Daniel F GudbjartssondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland.ORCID http://orcid.org/0000-0002-5222-9857
Patrick SulemdeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland. patrick.sulem@decode.is.ORCID http://orcid.org/0000-0001-7123-6123
Kari StefanssondeCODE Genetics/Amgen, Inc., Reykjavik, 101, Iceland. kstefans@decode.is.ORCID http://orcid.org/0000-0003-1676-864X
deCODE Genetics (Iceland) · ISReykjavík University · ISAkureyri Hospital · IS

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gallstones are responsible for one of the most common diseases in the Western world and are commonly treated with cholecystectomy. We perform a meta-analysis of two genome-wide association studies of gallstone disease in Iceland and the UK, totaling 27,174 cases and 736,838 controls, uncovering 21 novel gallstone-associated variants at 20 loci. Two distinct low frequency missense variants in SLC10A2, encoding the apical sodium-dependent bile acid transporter (ASBT), associate with an increased risk of gallstone disease (Pro290Ser: OR = 1.36 [1.25-1.49], P = 2.1 × 10

Indexed as

alpha 1-AntitrypsinGallstonesGenome-Wide Association StudyHepatocyte Nuclear Factor 4HumansMutation, MissenseOrganic Anion Transporters, Sodium-DependentSymportersalpha 1-AntitrypsinHepatocyte Nuclear Factor 4HNF4A protein, humanOrganic Anion Transporters, Sodium-DependentSERPINA1 protein, humansodium-bile acid cotransporterSymporters

Identifiers

PMID30504769
PMCPMC6269469
OpenAlexW2902726051

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.