Evidence map›Paper›PMID 30504757›Full record

ArticleMedical science monitor : international medical journal of experimental and clinical research2018

High-Throughput Sequencing Strategy for miR-146b-regulated circRNA Expression in Hepatic Stellate Cells.

Na Cheng, Juhua Xiao, Shanfei Ge, Juntao Li, Jiansheng Huang, Xiaoping Wu, Shouhua Zhang, Tianxin Xiang

Abstract read
In one paragraph

Article in Medical science monitor : international medical journal of experimental and clinical research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Na ChengDepartment of Infectious Diseases, The First Affiliated Hospital of Nanchang University, Nanchang, Jiangxi, China (mainland).
Juhua XiaoDepartment of Ultrasound, Jiangxi Maternal and Child Health Hospital, Nanchang, Jiangxi, China (mainland).
Shanfei GeDepartment of Infectious Diseases, The First Affiliated Hospital of Nanchang University, Nanchang, Jiangxi, China (mainland).
Juntao LiDepartment of General Surgery, GanZhou People's Hospital, Ganzhou, Jiangxi, China (mainland).
Jiansheng HuangDepartment of Infectious Diseases, The First Affiliated Hospital of Nanchang University, Nanchang, Jiangxi, China (mainland).
Xiaoping WuDepartment of Infectious Diseases, The First Affiliated Hospital of Nanchang University, Nanchang, Jiangxi, China (mainland).
Shouhua ZhangDepartment of General Surgery, Jiangxi Provincial Children's Hospital, Nanchang, Jiangxi, China (mainland).
Tianxin XiangDepartment of Infectious Diseases, The First Affiliated Hospital of Nanchang University, Nanchang, Jiangxi, China (mainland).

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND This study was designed to detect and analyze miR-146b-mediated circular RNA (circRNA) expression in hepatic stellate cells. MATERIAL AND METHODS The experiment was divided into a control group and a siRNA-miR-146b group. The interference efficiency of siRNA-miR-146b was confirmed by real-time quantitative reverse transcription PCR (qRT-PCR) and the cells were collected, and total RNA was collected for high flux sequencing. The miRNA-targeted carcass were predicted. Finally, the expression of 5 circRNAs was verified by qRT-PCR. RESULTS miR-146b expression in the siRNA-miR-146b group was significantly lower than that in the control group. The quality of the original sequencing data and the processed data satisfied with the analysis, and the expression of circRNAs was modulated after the reduction of miR-146b. Among them, 18 circRNAs were upregulated, while 77 circRNAs were downregulated in the miR-146b group compared with the control group. The gene prediction showed that hsa_circ1887 was the largest contact point in miRNA and circRNA regulatory networks. qRT-PCR showed that rno-circRNA-469, rno-circRNA-1138, rno-circRNA-2168 and rno-circRAN-1907 were significantly reduced, while circRNA-1984 was significantly promoted in the siRNA-miR-146b group compared with the control group, which were consistent with the measurements by high-throughput sequencing technique. CONCLUSIONS miR-146b could regulate the expression of circRNAs in HSCs, which might take part in the formation and development of hepatic fibrosis.

Indexed as

Computational BiologyGene Expression RegulationHepatic Stellate CellsHigh-Throughput Nucleotide SequencingHumansMicroRNAsRNARNA, CircularRNA, Small InterferingMicroRNAsMIRN146 microRNA, humanRNARNA, CircularRNA, Small Interfering

Identifiers

PMID30504757
PMCPMC6286633

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.