Evidence map›Paper›PMID 30504364›Full record

ArticleGenetics2019

Strategies for Efficient Genome Editing Using CRISPR-Cas9.

Behnom Farboud, Aaron F Severson, Barbara J Meyer

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
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  4. TAG-IN, a swappable strategy for endogenous gene tagging inbioRxiv : the preprint server for biology · 2026
    Article
  5. FLInt 2.0: Robust and customizable single shot integration inbioRxiv : the preprint server for biology · 2026
    Article
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  15. Review
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  17. Binding profiles for 954 Drosophila andbioRxiv : the preprint server for biology · 2024
    Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Behnom FarboudHoward Hughes Medical Institute and Department of Molecular and Cell Biology, University of California, Berkeley, California 94720-3204.ORCID 0000-0001-7439-3095
Aaron F SeversonCenter for Gene Regulation in Health and Disease, Cleveland State University, Ohio 44115.ORCID 0000-0002-0300-0669
Barbara J MeyerHoward Hughes Medical Institute and Department of Molecular and Cell Biology, University of California, Berkeley, California 94720-3204 bjmeyer@berkeley.edu.ORCID 0000-0002-6530-4588
Cleveland State University · USHoward Hughes Medical Institute · USUniversity of California, Berkeley · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
NEMATODE SEX DETERMINATIONR01GM030702 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI MEYER, BARBARA J · 1985 to 2018
$6.1M
Analysis of Nematode Sex Determination and Dosage CompensationR35GM131845 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI MEYER, BARBARA J · 2019 to 2023
$2.3M
Specification of meiotic cohesin function by divergent alpha-kleisin subunitsR15GM117548 · NIGMS · CLEVELAND STATE UNIVERSITY · PI SEVERSON, AARON F · 2016 to 2016
$425k
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM030702NIGMS NIH HHS R15 GM117548NIGMS NIH HHS R35 GM131845NIH HHS P40 OD010440
6 · The paper itself

Abstract

The targetable DNA endonuclease CRISPR-Cas9 has transformed analysis of biological processes by enabling robust genome editing in model and nonmodel organisms. Although rules directing Cas9 to its target DNA via a guide RNA are straightforward, wide variation occurs in editing efficiency and repair outcomes for both imprecise error-prone repair and precise templated repair. We found that imprecise and precise DNA repair from double-strand breaks (DSBs) is asymmetric, favoring repair in one direction. Using this knowledge, we designed RNA guides and repair templates that increased the frequency of imprecise insertions and deletions and greatly enhanced precise insertion of point mutations in

Indexed as

CRISPR-Cas SystemsAnimalsCaenorhabditis elegansGene EditingCaenorhabditis elegansCRISPR-Cas9DNA repairGenome editinghomology-directed repair

Identifiers

PMID30504364
PMCPMC6366907
OpenAlexW2899689762

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.