Evidence map›Paper›PMID 30502323›Full record

ArticleGastroenterology2019

Integrated Analysis of Mouse and Human Gastric Neoplasms Identifies Conserved microRNA Networks in Gastric Carcinogenesis.

Zheng Chen, Zheng Li, Mohammed Soutto, Weizhi Wang, M Blanca Piazuelo, Shoumin Zhu, Yan Guo, Maria J Maturana, Alejandro H Corvalan, Xi Chen and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Gastroenterology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Review
  3. CDK1 drives SOX9-mediated chemotherapeutic resistance in gastric cancer.Journal of experimental & clinical cancer research : CR · 2025
    Article
  4. Helicobacter Pylori-induced BRD2 mInternational journal of biological sciences · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. The miRNA: a small but powerful RNA for COVID-19.Briefings in bioinformatics · 2021
    Review
  20. The regulation of protein translation and its implications for cancer.Signal transduction and targeted therapy · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

Zheng ChenDepartment of General Surgery, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China; Department of Surgery, Miller School of Medicine, University of Miami, Miami, Florida.
Zheng LiDepartment of General Surgery, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Mohammed SouttoDepartment of Surgery, Miller School of Medicine, University of Miami, Miami, Florida; Department of Veterans Affairs, Miami Healthcare System, Miami, Florida.
Weizhi WangDepartment of General Surgery, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
M Blanca PiazueloDepartment of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee.
Shoumin ZhuDepartment of Surgery, Miller School of Medicine, University of Miami, Miami, Florida.
Yan GuoBioinformatics Shared Resources, University of New Mexico Comprehensive Cancer Center, New Mexico.
Maria J MaturanaAdvanced Center for Chronic Diseases, Faculty of Medicine, Pontificia Universidad Catolica de Chile, Santiago, Chile.
Alejandro H CorvalanAdvanced Center for Chronic Diseases, Faculty of Medicine, Pontificia Universidad Catolica de Chile, Santiago, Chile.
Xi ChenDepartment of Public Health Sciences, Miller School of Medicine, University of Miami, Miami, Florida.
Zekuan XuDepartment of General Surgery, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China; Jiangsu Key Lab of Cancer Biomarkers, Prevention and Treatment, Collaborative Innovation Center for Cancer Personalized Medicine, Nanjing Medical University, Nanjing, China. Electronic address: xuzekuan@njmu.edu.cn.
Wael M El-RifaiDepartment of Surgery, Miller School of Medicine, University of Miami, Miami, Florida; Department of Veterans Affairs, Miami Healthcare System, Miami, Florida; Sylvester Comprehensive Cancer Center, Miller School of Medicine, University of Miami, Miami, Florida. Electronic address: welrifai@med.miami.edu.
University of Miami · USJiangsu Province Hospital · CNPontificia Universidad Católica de Chile · CLJiangsu Cancer Hospital · CNUniversity of New Mexico · USVanderbilt University Medical Center · US

Funding

Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
Targets of Gene Overexpression at 17q in Gastric Tumorigenesis: Darpp32R01CA093999 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI EL-RIFAI, WAEL · 2002 to 2017
$4.5M
The Role of miRNA Network in Gastric CancerR01CA177372 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI EL-RIFAI, WAEL · 2013 to 2015
$446k
Molecular Pathobiology of Gastric CarcinogenesisI01BX001179 · VA · VETERANS HEALTH ADMINISTRATION · PI EL-RIFAI, WAEL · 2012 to 2024
–
BLRD Research Career Scientist Award ApplicationIK6BX003787 · VA · VETERANS HEALTH ADMINISTRATION · PI WAEL EL-RIFAI · 2017 to 2026
–
BLRD VA I01 BX001179BLRD VA IK6 BX003787NCI NIH HHS R01 CA093999NCI NIH HHS R01 CA177372NIDDK NIH HHS P30 DK058404
6 · The paper itself

Abstract

BACKGROUND &

aimsmicroRNAs (miRNAs) are small noncoding RNAs that bind to the 3' untranslated regions of mRNAs to promote their degradation or block their translation. Mice with disruption of the trefoil factor 1 gene (Tff1) develop gastric neoplasms. We studied these mice to identify conserved miRNA networks involved in gastric carcinogenesis.

methodsWe performed next-generation miRNA sequencing analysis of normal gastric tissues (based on histology) from patients without evidence of gastric neoplasm (n = 64) and from TFF1-knockout mice (n = 22). We validated our findings using 270 normal gastric tissues (including 61 samples from patients without evidence of neoplastic lesions) and 234 gastric tumor tissues from 3 separate cohorts of patients and from mice. We performed molecular and functional assays using cell lines (MKN28, MKN45, STKM2, and AGS cells), gastric organoids, and mice with xenograft tumors.

resultsWe identified 117 miRNAs that were significantly deregulated in mouse and human gastric tumor tissues compared with nontumor tissues. We validated changes in levels of 6 miRNAs by quantitative real-time polymerase chain reaction analyses of neoplastic gastric tissues from mice (n = 39) and 3 independent patient cohorts (n = 332 patients total). We found levels of MIR135B-5p, MIR196B-5p, and MIR92A-5p to be increased in tumor tissues, whereas levels of MIR143-3p, MIR204-5p, and MIR133-3p were decreased in tumor tissues. Levels of MIR143-3p were reduced not only in gastric cancer tissues but also in normal tissues adjacent to tumors in humans and low-grade dysplasia in mice. Transgenic expression of MIR143-3p in gastric cancer cell lines reduced their proliferation and restored their sensitivity to cisplatin. AGS cells with stable transgenic expression of MIR143-3p grew more slowly as xenograft tumors in mice than control AGS cells; tumor growth from AGS cells that expressed MIR143-3p, but not control cells, was sensitive to cisplatin. We identified and validated bromodomain containing 2 (BRD2) as a direct target of MIR143-3p; increased levels of BRD2 in gastric tumors was associated with shorter survival times for patients.

conclusionsIn an analysis of miRNA profiles of gastric tumors from mice and human patients, we identified a conserved signature associated with the early stages of gastric tumorigenesis. Strategies to restore MIR143-3p or inhibit BRD2 might be developed for treatment of gastric cancer.

Indexed as

AnimalsAntineoplastic AgentsBromodomain Containing ProteinsCarcinogenesisCase-Control StudiesCell Line, TumorCell ProliferationChromosomal Proteins, Non-HistoneCisplatinDown-RegulationDrug Resistance, NeoplasmFemaleHigh-Throughput Nucleotide SequencingHumansMiceMice, KnockoutAntineoplastic AgentsBRD2 protein, humanBrd2 protein, mouseBromodomain Containing ProteinsChromosomal Proteins, Non-HistoneCisplatinMicroRNAsMIRN143 microRNA, humanMIRN143 microRNA, mouseMYC protein, humanProtein Serine-Threonine KinasesProto-Oncogene Proteins c-mycTff1 protein, mouseTranscription FactorsTrefoil Factor-1ProgressionStomachTranscription FactorTumor Suppressor

Identifiers

PMID30502323
PMCPMC6409191
OpenAlexW2902292345

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.