Evidence map›Paper›PMID 30501172›Full record

ArticleACS infectious diseases2019

The Fatty Acid Synthesis Protein Enoyl-ACP Reductase II (FabK) is a Target for Narrow-Spectrum Antibacterials for Clostridium difficile Infection.

Ravi K R Marreddy, Xiaoqian Wu, Madhab Sapkota, Allan M Prior, Jesse A Jones, Dianqing Sun, Kirk E Hevener, Julian G Hurdle

Abstract read
In one paragraph

Article in ACS infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. The critical role ofApplied and environmental microbiology · 2026
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  4. Evaluation ofACS infectious diseases · 2024
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  5. Antimicrobial agents and chemotherapy · 2024
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  6. Article
  7. Article
  8. Article
  9. Mining Fatty Acid Biosynthesis for New Antimicrobials.Annual review of microbiology · 2022
    Review
  10. Review
  11. Review
  12. Expert opinion on therapeutic targets · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Small-Molecule Inhibition of theACS chemical biology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Ravi K R MarreddyCenter for Infectious and Inflammatory Diseases, Institute of Biosciences and Technology , Texas A&M Health Science Center , 2121 West Holcombe Boulevard , Houston , Texas 77030 , United States.
Xiaoqian WuCenter for Infectious and Inflammatory Diseases, Institute of Biosciences and Technology , Texas A&M Health Science Center , 2121 West Holcombe Boulevard , Houston , Texas 77030 , United States.
Madhab SapkotaDepartment of Biology , University of Texas Arlington , 701 West Nedderman Drive , Arlington , Texas 76019 , United States.
Allan M PriorDepartment of Pharmaceutical Sciences, The Daniel K. Inouye College of Pharmacy , University of Hawaii at Hilo , 34 Rainbow Drive , Hilo , Hawaii 96720 , United States.ORCID 0000-0001-5650-4644
Jesse A JonesDepartment of Pharmaceutical Sciences, College of Pharmacy , University of Tennessee Health Science Center , 881 Madison Avenue , Memphis , Tennessee 38105 , United States.
Dianqing SunDepartment of Pharmaceutical Sciences, The Daniel K. Inouye College of Pharmacy , University of Hawaii at Hilo , 34 Rainbow Drive , Hilo , Hawaii 96720 , United States.ORCID 0000-0001-7330-1742
Kirk E HevenerDepartment of Pharmaceutical Sciences, College of Pharmacy , University of Tennessee Health Science Center , 881 Madison Avenue , Memphis , Tennessee 38105 , United States.ORCID 0000-0002-5584-3625
Julian G HurdleCenter for Infectious and Inflammatory Diseases, Institute of Biosciences and Technology , Texas A&M Health Science Center , 2121 West Holcombe Boulevard , Houston , Texas 77030 , United States.ORCID 0000-0003-2214-8105
Texas A&M Health Science Center · USUniversity of Hawaii at Hilo · USUniversity of Tennessee Health Science Center · USThe University of Texas at Arlington · US

Funding

UH Hilo COP A&RP20GM103466 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI Peter R Hoffmann · 2012 to 2026
$60.3M
Investigation of the FAS-II enzyme, FabK, as a druggable target for C. difficileR21AI126755 · NIAID · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI HEVENER, KIRK EDWARD, HURDLE, JULIAN G · 2016 to 2017
$424k
NIAID NIH HHS R21 AI126755NIGMS NIH HHS P20 GM103466
6 · The paper itself

Abstract

Clostridium difficile infection (CDI) is an antibiotic-induced microbiota shift disease of the large bowel. While there is a need for narrow-spectrum CDI antibiotics, it is unclear which cellular proteins are appropriate drug targets to specifically inhibit C. difficile. We evaluated the enoyl-acyl carrier protein (ACP) reductase II (FabK), which catalyzes the final step of bacterial fatty acid biosynthesis. Bioinformatics showed that C. difficile uses FabK as its sole enoyl-ACP reductase, unlike several major microbiota species. The essentiality of fabK for C. difficile growth was confirmed by failure to delete this gene using ClosTron mutagenesis and by growth inhibition upon gene silencing with CRISPR interference antisense to fabK transcription or by blocking protein translation. Inhibition of C. difficile's FASII pathway could not be circumvented by supply of exogenous fatty acids, either during fabK's gene silencing or upon inhibition of the enzyme with a phenylimidazole-derived inhibitor (1). The inability of fatty acids to bypass FASII inhibition is likely due to the function of the transcriptional repressor FapR. Inhibition of FabK also inhibited spore formation, reflecting the enzyme's role in de novo fatty acid biosynthesis for the formation of spore membrane lipids. Compound 1 did not inhibit growth of key microbiota species. These findings suggest that C. difficile FabK is a druggable target for discovering narrow-spectrum anti- C. difficile drugs that treat CDI but avoid collateral damage to the gut microbiota.

Indexed as

Anti-Bacterial AgentsBiosynthetic PathwaysClostridioides difficileCRISPR-Cas SystemsCrystallography, X-RayDNA, AntisenseEnoyl-(Acyl-Carrier-Protein) Reductase (NADH)Fatty AcidsGene SilencingAnti-Bacterial AgentsDNA, AntisenseEnoyl-(Acyl-Carrier-Protein) Reductase (NADH)Fatty AcidsClostridium difficileCRISPR interference antisenseenoyl-ACP reductasenarrow-spectrum drug targetphenylimidazole-derived inhibitor

Identifiers

PMID30501172
PMCPMC6889869
OpenAlexW2902147362

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.