Evidence map›Paper›PMID 30501034›Full record

ArticleMolecules (Basel, Switzerland)2018

In Cellulo Protein-mRNA Interaction Assay to Determine the Action of G-Quadruplex-Binding Molecules.

Rodrigo Prado Martins, Sarah Findakly, Chrysoula Daskalogianni, Marie-Paule Teulade-Fichou, Marc Blondel, Robin Fåhraeus

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. G-Quadruplex Targeting in the Fight against Viruses: An Update.International journal of molecular sciences · 2021
    Review
  11. Article
  12. Deciphering nucleic acid knots.Nature chemistry · 2021
    Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 4 countries.

Rodrigo Prado MartinsUniversité Paris 7, Inserm, UMR 1162, 75013 Paris, France. rodrigo.prado-martins@inserm.fr.
Sarah FindaklyUniversité Paris 7, Inserm, UMR 1162, 75013 Paris, France. sarah.findakly@inserm.fr.
Chrysoula DaskalogianniUniversité Paris 7, Inserm, UMR 1162, 75013 Paris, France. chrysoula.daskalogianni@inserm.fr.
Marie-Paule Teulade-FichouChemistry, Modelling and Imaging for Biology, CNRS UMR9187-Inserm U1196, Institut Curie, Université Paris-Sud, F-91405, Orsay, France. mp.teulade-fichou@curie.fr.
Marc BlondelGGB, Université de Brest, Inserm, CHRU Brest, EFS, UMR 1078, F-29200 Brest, France. marc.blondel@univ-brest.fr.ORCID 0000-0003-4897-2995
Robin FåhraeusUniversité Paris 7, Inserm, UMR 1162, 75013 Paris, France. robin.fahraeus@inserm.fr.
Inserm · FRUniversité Paris-Sud · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein-RNA interactions (PRIs) control pivotal steps in RNA biogenesis, regulate multiple physiological and pathological cellular networks, and are emerging as important drug targets. However, targeting of specific protein-RNA interactions for therapeutic developments is still poorly advanced. Studies and manipulation of these interactions are technically challenging and in vitro drug screening assays are often hampered due to the complexity of RNA structures. The binding of nucleolin (NCL) to a G-quadruplex (G4) structure in the messenger RNA (mRNA) of the Epstein-Barr virus (EBV)-encoded EBNA1 has emerged as an interesting therapeutic target to interfere with immune evasion of EBV-associated cancers. Using the NCL-EBNA1 mRNA interaction as a model, we describe a quantitative proximity ligation assay (PLA)-based in cellulo approach to determine the structure activity relationship of small chemical G4 ligands. Our results show how different G4 ligands have different effects on NCL binding to G4 of the

Indexed as

G-QuadruplexesAminoquinolinesBiological AssayCell Line, TumorEpstein-Barr Virus Nuclear AntigensHumansNucleolinPhosphoproteinsPicolinic AcidsRNA-Binding ProteinsRNA, MessengerAminoquinolinesEBV-encoded nuclear antigen 1Epstein-Barr Virus Nuclear AntigensNucleolinPhosphoproteinsPicolinic AcidspyridostatinRNA-Binding ProteinsRNA, MessengerEBNA1Epstein-Barr virus (EBV)G-quadruplexesPhenDC3protein-mRNA interactionspyridostatinstructure-activity relationship

Identifiers

PMID30501034
PMCPMC6321085
OpenAlexW2902921100

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.